2016 & previous
Berry E, Bulpitt AJ. 2008. Fundamentals of MRI: An Interactive Learning Approach.
Berry E, Bulpitt AJ. 2009. Fundamentals of MRI: An Interactive Learning Approach, Series in Medical Physics and Biomedical Engineering.
Fincher S, Markopoulos P, Moore D, Ruddle RA. 2004. People and Computers XVIII - Design for Life.
HEAD D. 2000. Critical and glass transitions in a simple model of activated processes. In: Statistical Physics. 519.
HEAD D, LEVINE A, MACKINTOSH F. 2004. Deformation of crosslinked semiflexible polymer networks. In: Slow Dynamics in Complex Systems. 708.
Lassila T, Manzoni A, Quarteroni A, Rozza G. 2013. Generalized Reduced Basis Methods and n-Width Estimates for the Approximation of the Solution Manifold of Parametric PDEs. In:
Analysis and Numerics of Partial Differential Equations. 
Lassila T, Manzoni A, Quarteroni A, Rozza G. 2014. Model Order Reduction in Fluid Dynamics: Challenges and Perspectives. In:
Quarteroni A; Rozza G (eds.) Reduced Order Methods for Modeling and Computational Reduction. MS&A - Modeling, Simulation and Applications.

Magee DR, Tanner SF, Waller ML, McGonagle D, Jeavons AP. 2005. Registration of PET and MR hand volumes using Bayesian networks. In: Liu Y; Jiang T; Zhang C (eds.) Proceedings ICCV workshop on computer vision for biomedical image applications.
Ruddle RA. 2001. Navigation: Am I really lost or virtually there?. In:
Harris D (eds.) Engineering Psychology and Cognitive Ergonomics - Volume 6. 
Ruddle RA. 2013. The effect of translational and rotational body-based information on navigation. In:
Steinicke F; Visell Y; Campos J; Lecuyer A (eds.) Human Walking in Virtual Environments: Perception, Technology, and Applications.

Ruddle RA, Snowden RJ. 2001. Virtual reality. In: Blakemore C; Jennett S (eds.) The Oxford Companion to the Body.
Adam A, Bulpitt AJ, Treanor D. 2011. Texture Analysis of Virtual Slides for Grading Dysplasia in Barretts Oesophagus.. MIUA
Al-Megren S, Ruddle RA. 2016. Comparing Tangible and Multi-touch Interaction for Interactive Data Visualization Tasks. 10th International Conference on Tangible, Embedded and Embodied Interaction

Alzahrani AAS, Atwell ES, Bulpitt AJ. 2015. Multi-touch table technology for enhancing collaborative programming and learning. The 8th Saudi Students Conference

Bello F, Bulpitt AJ, Gould DA, Holbrey R, Hunt C, How T, John NW, Johnson S, Phillips R, Sinha A, Vidal FP, Villard P-F, Woolnough H, Zhang Y. 2009. ImaGINe-S: Imaging Guided Interventional Needle Simulation.. Eurographics (Medical Prize)
Bennett A, Magee D. 2008. Learning sets of sub-models for spatio-temporal prediction. Research and Development in Intelligent Systems XXIV

Bennett B, Magee DR, Cohn AG, Hogg DC. 2004. Using spatio-temporal continuity constraints to enhance visual tracking of moving objects. 16th European Conference on Artificial Intelligence
Biglands J, Larghat A, Plein S, Buckley D, Jerosch-Herold M, Magee D, Boyle RD, Radjenovic A. 2010. Saturation Correction of Dynamic Contrast Enhanced MRI (DCE-MRI) Uptake Curves for Quantitative Myocardial Blood Flow (MBF) Measurement Using an Assumed T1 for Blood. 18th International Society of Magnetic Resonance in Medicine Scientific Meeting, ISMRM 2010"
Birtwisle M, Bulpitt AJ. 2007. A 6DOF gravity compensation scheme for a Phantom Premium using a neural network. Medecine Meets Virtual Reality 15 - in viva, in vitro, in silico: Designing the Next in Medicine
Boyle JH, Bryden JA, Cohen N. 2008. An integrated neuro-mechanical model of C. elegans forward locomotion. Neural Information Processing, 14th International Conference, ICONIP 2007, Revised Selected Papers, Part I

Boyle JH, Cohen N. 2007. The role of body wall muscles in C. elegans locomotion. Proceedings of the Seventh International Workshop on Information Processing in Cells and Tissues

Bradford JR, Needham CJ, Bulpitt AJ, Westhead DR. 2006. Insights into protein-protein interfaces using a Bayesian network prediction method. Interdisciplinary Statistics and Bioinformatics
Brasel H, Shakhlevitch N. 2003. LiSA - fit for cooperative development. Sixth Workshop on Models and Algorithms for Planning and Scheduling Problems (MAPSP'03)
Bruning-Richardson A. 2014. High resolution three-dimensional histological reconstruction of glioma spheroids and application in research. SNO
Bryden JA, Cohen N. 2004. A simulation model of the locomotion controllers for the Nematode Caenorhabditis elegans. From Animals to Animats 8: Proceedings of the Eighth International Conference on Simulation of Adaptive Behavior

Buckley CL, Bullock SG, Cohen N. 2004. Towards a dynamical systems analysis of neuromodulation. From Animals to Animats 8: Proceedings of the Eighth International Conference on Simulation of Adaptive Behavior

Buckley CL, Bullock SG, Cohen N. 2005. Timescale and stability in adaptive behaviour. Advances in Artificial Life: 8th European Conference on Artificial Life, ECAL2005

Bulpitt AJ, Allinson NM. 1991. Motion perception and recognition using moving light displays. IEE Conference Publication
Bulpitt AJ, Berry E, Boyle RD, Scott DJA, Kessel D. 2000. A deformable model, incorporating expected structure information, for automatic 3D segmentation of complex anatomical structures. CARS 2000: Computer Assisted Radiology and Surgery 2000
Carey D, Wijayathunga VN, Bulpitt AJ, Treanor D. 2015. A Novel Approach for the Colour Deconvolution of Multiple Histological Stains. Medical Image Understanding and Analysis

Charles J, Magee D, Hogg D. 2016. Virtual Immortality: Reanimating Characters from TV Shows. European Conference on Computer Vision

Charles J, Pfister T, Magee D, Hogg D, Zisserman A. 2014. Upper body pose estimation with temporal sequential forests. 2014 British Machine Vision Conference

Charles J, Pfister T, Magee D, Hogg DC, Zisserman A. 2016. Personalizing Human Video Pose Estimation. IEEE Conference on Computer Vision and Pattern Recognition (CVPR)

Cheng TCE, Shakhlevitch N. 2002. Minimizing nondecreasing separable objective functions for the unit-time open shop scheduling problem. Proceedings of the 8th International Workshop on Project Management and Scheduling (PMS'02)
Cheng TCE, Shakhlevitch N. 2004. Two-machine open shop scheduling problem with controllable processing times. Ninth International Workshop on Project Management and Scheduling (PMS'04)
Cohn AG, Hogg DC, Bennett B, Devin VE, Galata A, Magee DR, Needham CJ, Santos PE. 2006. Cognitive vision: integrating symbolic qualitative representations with computer vision. Cognitive Vision Systems: Sampling the Spectrum of Approaches
Cohn AG, Magee DR, Galata A, Hogg DC, Hazarika SM. 2003. Towards an architecture for cognitive vision using qualitative spatio-temporal representations and abduction. Spatial Cognition III, Routes and Navigation, Human Memory and Learning, Spatial Representation and Spatial Learning
Cook S, Ruddle RA. 2014. Effect of simplicity and attractiveness on route selection for different journey types. Spatial Cognition IX International Conference, Spatial Cognition 2014, Proceedings

Crocker TF, Johnson OA, King SF. 2007. Towards a formalisation of care pathways to embody good practice in healthcare. eGovernment Workshop ’07 (eGOV07)
Danso S, Atwell E, Johnson O. 2013. Linguistic and statistically derived features for cause of death prediction from verbal autopsy text. 25th International Conference, GSCL

Do TV, Ruddle RA. 2012. The design of a visual history tool to help users refind information within a website. Advances in Information Retrieval, 34th European Conference on IR Research, ECIR 2012, Proceedings

Dodds TJ, Ruddle RA. 2008. Using Teleporting, Awareness and Multiple Views to Improve Teamwork in Collaborative Virtual Environments. Proceedings of the 14th Eurographics Symposium on Virtual Environments (EGVE'08)
Dodds TJ, Ruddle RA. 2008. Mobile group dynamics in large-scale collaborative virtual environments. IEEE VIRTUAL REALITY 2008, PROCEEDINGS

Dodds TJ, Ruddle RA. 2008. Mobile Group Dynamics in Large-Scale Collaborative Virtual Environments. Proceedings of IEEE Virtual Reality (VR'08)
Dodds TJ, Ruddle RA. 2008. Using Teleporting, Awareness and Multiple Views to Improve Teamwork in Collaborative Virtual Environments. Proceedings of the 14th Eurographics Symposium on Virtual Environments (EGVE'08)
Dodds TJ, Ruddle RA. 2008. Using teleporting, awareness and multiple views to improve teamwork in collaborative virtual environments. 14th Eurographics Symposium on Virtual Environments

Du H, Dimitrova V, Magee D, Stirling R, Curioni G, Reeves H, Clarke B, Cohn A. 2016. An Ontology of Soil Properties and Processes. ISWC 2016: The 15th International Semantic Web Conference

Eirola T, Lassila T. 2009. Optimization of Convex Shapes: An Approach to Crystal Shape Identification. 
Engwer C, Ranner T, Westerheide S. 2016. An unfitted discontinuous Galerkin scheme for conservation laws on
evolving surfaces. ALGORITMY 2016

Fletcher S, Bulpitt AJ, Hogg D. 1996. Global Alignment of MR Images Using a Scale Based Hierarchical Model.. Computer Vision ECCV'96 Vol. 2

Galata A, Cohn AG, Magee DR, Hogg DC. 2002. Learning temporal and qualitative spatial components of an interaction model. Proceedings ECCV Workshop on Vision and Modelling of Dynamic Scenes (VAMODS)
Galata A, Cohn AG, Magee DR, Hogg DC. 2002. Modeling interaction using learnt qualitative spatio-temporal relations and variable length Markov models. Proceedings of the 15th European Conference on Artificial Intelligence (ECAI'02)
Gatsoulis I, Mehmood MO, Dimitrova VG, Magee DR, Sage-Vallier B, Thiaudiere P, Valdes J, Cohn AG. 2016. Learning the Repair Urgency for a Decision Support System for Tunnel Maintenance. ECAI 2016: 22nd European Conference on Artificial Intelligence

Gilbert SH, Bernus O, White E, Roberts N, Treanor D, Magee D. 2014. A framework for quantification of regional cardiac fibrosis from serial sections using 3D whole slide imaging. 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society

Gould DA, Healey A, Brodlie KW, Bulpitt AJ, John NW, Phillips R, Ward JW. 2004. Challenges in realising effective radiological interventional virtual environments - The CRaIVE approach. Medicine Meets Virtual Reality 12 - Building a Better You: The Next Tools for Medical Education, Diagnosis and Care
Grekioti A, Shakhlevich NV. 2014. Scheduling bag-of-tasks applications to optimize computation time and cost. 10th International Conference on Parallel Processing and Applied Mathematics (PPAM 2013)

Hama L, Ruddle RA, Paton D. 2014. Geological orientation measurements using an iPad: Method comparison. TPCG 2014 - Theory and Practice of Computer Graphics, Proceedings

Harding-Esch E, Sherrard-Smith E, Dangerfield C, Choi YH, Green N, Jit M, Marshall RD, Mercer C, Nardone A, Howell-Jones R, Johnson OA, Clarkson J, Wolstenholme J, Price CP, Gaydos CA, Sadiq ST, White PJ, Lowndes CM. 2015. P08.29 Web-tool to assess the cost-effectiveness of chlamydia point-of-care tests at the local level. STI & HIV World Congress 2015

Hina S, Atwell E, Johnson O. 2010. Secure information extraction from clinical documents using SNOMED CT gazetteer and natural language processing. 2010 International Conference for Internet Technology and Secured Transactions (ICITST)
Hina S, Atwell E, Johnson O, West R. 2010. Extracting the concepts in Clinical Documents using SNOMED-CT and GATE. Fourth i2b2/VA Shared-Task and Workshop Challenges in Natural Language Processing for Clinical Data
Hogg DC, Cohn AG, Devin VE, Magee DR, Needham CJ, Santos PE. 2005. Learning about objects and activities. Quantitative Biology, Shape Analysis and Wavelets - The 24th Leeds Annual Statistical Workshop
Holbrey R, Bulpitt AJ. 2003. Metrics and motion analysis for assessment of surgical skills. 11th Annual Medicine Meets Virtual Reality, January 22-25, 2003
Holbrey R, Bulpitt AJ, Brodlie KW, Walkley MA, Scott J. 2004. A model for virtual suturing in vascular surgery. Proceedings Theory and Practice of Computer Graphics 2004
Jaafar J, Atwell E, Johnson O, Clamp S, Ahmad W. 2013. Evaluation of Machine Learning Techniques in Predicting Acute Coronary Syndrome Outcome. AI’2013 International Conference on Artificial Intelligence
Jamil A, Bulpitt AJ. 2011. Flythrough data exploration using multi-level classification driven focus and context.. MIUA
John N, Luboz V, Bello F, Vidal F, Lim IS, How TV, Zhai J, Johnson S, Chalmers N, Brodlie KW, Bulpitt A, Song Y, Kessel DO, Phillips R, Wills D, Ward JW, Crawshaw CM, Gould DA. 2008. Physics-based virtual environment for training core skills in vascular interventional radiological procedures. Medicine Meets Virtual Reality 2008
John NW, Luboz V, Bello F, Hughes C, Vidal F, Lim IS, How J, Zhai J, Johnson S, Chalmers N, Brodlie K, Bulpitt AJ, Song Y, Kessel DO, Phillips R, Ward JW, Pisharody S, Zhang Y, Gould D. 2008. Physics-based virtual environment for training core skills in vascular interventional radiological procedures. Medicine Meets Virtual Reality
Johnson OA, King SF. 2005. Modelling process variety and best practice - an e-government example. UK Academy for Information Systems Conference 2005, Newcastle, March 22-24
Johnson OA, King SF. 2005. Best practice in local e-government: a process modelling approach. eGovernment Workshop '05 (eGOV05), Brunel University
Jones AC, Magee DR, Bulpitt AJ, Wilcox RK. 2006. A level-set based medical image segmentation tool for the creation of spinal finite element models. 5th World Congress of Biomechanics
Jones AC, Wilcox RK, Magee DR, Bulpitt AJ. 2006. Level-set based medical image segmentation tools for the creation of spinal finite element models. Computer Methods in Biomechanics and Biomedical Engineering CMBBE2006
Kengyelics SM, Gislason-Lee AJ, Keeble C, Magee D, Davies AG. 2015. Machine vision image quality measurement in cardiac x-ray
imaging. SPIE Electronic Imaging

King SF, Johnson OA. 2004. Understanding process variety and best practice in local e-government. Proceedings of the 5th We-B Conference (Working with E-Business), Perth, Western Australia, 25-26 November 2004
Kurniati AP, Johnson OA, Hogg D, Hall G. 2016. Process Mining in Oncology: a Literature Review. 2016 6th International Conference on Information Communication and Management (ICICM)

Lange M, Palamara S, Lassila T, Vergara C, Quarteroni A, Frangi AF. 2015. Efficient Numerical Schemes for Computing Cardiac Electrical Activation over Realistic Purkinje Networks: Method and Verification. FIMH 2015: 8th International Conference on Functional Imaging and Modeling of the Heart

Lassila T, Lange M, Porras Perez AR, Lekadir K, Albà X, Piella G, Frangi AF. 2016. Electrophysiology model for a human heart with ischemic scar and realistic Purkinje network. STACOM 2015

Lassila T, Manzoni A, Rozza G. 2013. Reduction Strategies for Shape Dependent Inverse Problems in Haemodynamics. 
Lessels S, Ruddle RA. 2004. Changes in navigational behaviour produced by a wide field of view and a high fidelity visual scene. Proceedings of the 10th Eurographics Symposium on Virtual Environments (EGVE'04)

Liang Y, Wang F, Treanor D, Magee DR, Teodoro G, Zhu Y, Kong J. 2015. Liver whole slide image analysis for 3D vessel reconstruction. IEEE International Symposium on Biomedical Imaging

Liang Y, Wang F, Treanor D, Magee DR, Teodoro G, Zhu Y, Kong J. 2015. A 3D Primary Vessel Reconstruction Framework with Serial Microscopy Images. 18th International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI)

Lowndes CM, Sherrard-Smith E, Dangerfield C, Choi YH, Green N, Jit M, Marshall RD, Mercer C, Harding-Esch E, Nardone A, Howell-Jones R, Bason J, Johnson OA, Price CP, Gaydos CA, Sadiq ST, White PJ. 2014. Point-of-care testing versus standard practice for chlamydia: a new approach to assessing the public health effect of rapid testing and treatment at local level. European Public Health Science Conference

Lucas C, Bulpitt AJ. 2004. Automatic identification of key sub-structures for protein annotation. Proceedings of the 2004 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences
Lucas C, Bulpitt AJ. 2004. Automatic identification of key patterns within multiple protein structures. 12th International Conference on Intelligent Systems for Molecular Biology
Magee D, Treanor D, Crellin D, Shires M, Smith K, Mohee K, Quirke P. 2009. Colour Normalisation in Digital Histopathology Images. Optical Tissue Image Analysis in Microscopy, Histopathology and Endoscopy

Magee DR. 2002. A qualitative, multi-scale grammar for image description and analysis. British Machine Vision Conference 2002
Magee DR. 2002. Tracking multiple vehicles using foreground, background and motion models. Proceedings ECCV Workshop on Statistical Methods in Video Processing
Magee DR. 2003. A sequential scheduling approach to combining multiple object classifiers using cross-entropy.
Magee DR, Boyle RD. 1998. Building Shape Models from Image Sequences using Piecewise Linear Approximation.. BMVC
Magee DR, Boyle RD. 1999. Building Class Sensitive Models for Tracking Applications.. BMVC
Magee DR, Boyle RD. 2000. Spatio-temporal modeling in the farmyard domain. 1st International Workshop on Articulated Motion and Deformable Objects

Magee DR, Boyle RD. 2000. Detecting Lameness in Livestock using Resampling Condensation and Multi-stream Cyclic Hidden Markov Models.. BMVC2000 11th British Machine Vision Conference Volume 1
Magee DR, Bulpitt AJ, Berry E. 2001. Combining 3D deformable models and level set methods for the segmentation of abdominal aortic aneurysms. British Machine Vision Conference; 12th., Manchester, Sept. 2001
Magee DR, Bulpitt AJ, Berry E. 2001. 3D automated segmentation and structural analysis of vascular trees using deformable models. IEEE Workshop on Variational and level set methods in computer vision, Vancouver, Canada, July 2001 - VLSM 2001
Magee DR, Bulpitt AJ, Berry E. 2001. Level set methods for the 3D segmentation of CT images of abdominal aortic aneurysms. Proceedings of Medical Image Understanding and Analysis 2001
Magee DR, Kessel D. 2005. A computer based simulator for ultrasound guided needle procedure. Proceedings IEE International Conference on Visual Information Engineering
Magee DR, Liebe B. 2003. Online face tracking using a feature driven level-set. Proceedings of the 14th British Machine Vision Conference
Magee DR, Needham CJ, Santos PE, Cohn AG, Hogg DC. 2004. Autonomous learning for a cognitive agent using continuous models and inductive logic programming from audio-visual input. Proceedings AAAI-04 Workshop on Anchoring Symbols to Sensor Data
Magee DR, Needham CJ, Santos PE, Rao S. 2005. Inducing the focus of attention by observing patterns in space. IJCAI Workshop on Modelling Others from Observations (MOO 2005)
Magee DR, Tanner SF, Waller ML, McGonagle D, Jeavons AP. 2005. Registration of PET and MR hand volumes using Bayesian Networks. Proceedings ICCV Workshop on Computer Vision for Biomedical Image Applications

Mizuno D, Head D, MacKintosh FC, Schmidt CF. 2011. Motor-driven force fluctuations in suspended cells and in cytoskeletal model systems.. Molecular Biology of the Cell
Naylor R, O'Keefe S, Austin J, Cohen N. 2011. Coordination of multi-layered neural computation - A neural pipeline approach. AISB 2011 Convention - Proceedings of the AISB 2011 Symposium on Architectures for Active Vision
Neagle R, Ng KC, Ruddle RA. 2002. Notation and 3D animation of dance movement. Proceedings of the International Computer Music Conference (ICMC2002)
Neagle R, Ng KC, Ruddle RA. 2003. Studying the fidelity requirements for a virtual ballet dancer. Proceedings of Vision, Video, and Graphics (VVG'03)
Neagle R, Ng KC, Ruddle RA. 2004. Developing a virtual ballet dancer to visualise choreography. Proceedings of the AISB 2004 Symposium on Language, Speech and Gesture for Expressive Characters
Needham CJ, Bradford JR, Bulpitt AJ, Westhead DR. 2005. Application of Bayesian networks to two classification problems in bioinformatics. Quantitative Biology, Shape Analysis and Wavelets
Nguyen BK, Boyle JH, Dehghani-Sanij AA, Cohen N. 2009. A C. elegans-Inspired Micro-Robot with Polymeric Actuators and Online Vision. IEEE International Conference on Robotics and Biomimetics (ROBIO)
Petrie T, Magee DR, Sykes JR. 2010. Modeless motion binning in Cone Beam CT. 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro

Petrie T, Magee DR, Sykes JR. 2010. Binning Without a Model For Cone-Beam CT. Proceedings of Medical Image Understanding and Analysis (MIUA)
Pretorious AJ, Magee DR, Treanor D, Ruddle RA. 2012. Visual parameter optimization for biomedical image analysis: a case study. Proceedings of SIGRAD
Primas B, Djemame K, Garraghan P, Shakhlevich N. 2016. Resource boxing: Converting realistic cloud task utilization patterns for theoretical scheduling. 9th IEEE/ACM International Conference on Utility and Cloud Computing, UCC 2016

Randell R, Hutchins G, Sandars J, Ambepitiya T, Treanor D, Thomas R, Ruddle R. 2012. Using a high-resolution wall-sized virtual microscope to teach undergraduate medical students. CHI '12: CHI Conference on Human Factors in Computing Systems

Ravikumar N, Castro-Mateos I, Pozo JM, Frangi AF, Taylor ZA. 2015. 3D active shape models of human brain structures: application to patient-specific mesh generation. SPIE Medical Imaging

Ravikumar N, Gooya A, Frangi AF, Taylor ZA. 2016. Robust group-wise rigid registration of point sets using t-mixture model. SPIE Medical Imaging

Ravikumar N, Gooya A, Çimen S, Frangi AF, Taylor ZA. 2016. A Multi-resolution T-Mixture Model Approach to Robust Group-Wise Alignment of Shapes. 
Rooney C, Ruddle RA. 2008. A New Method for Interacting with Multi-Window
Applications on Large, High Resolution Displays. Proceedings of the 6th Theory and Practice of Computer Graphics Conference (TP.CG.08)
Rooney C, Ruddle RA. 2015. HiReD: a high-resolution multi-window visualisation environment for cluster-driven displays. 7th ACM SIGCHI Symposium on Engineering Interactive Computing Systems

Rozza G, Lassila T, Manzoni A. 2011. Reduced Basis Approximation for Shape Optimization in Thermal Flows with a Parametrized Polynomial Geometric Map. 
Ruddle RA. 2004. The effect of environment characteristics and user interaction on levels of virtual environment sickness. Proceedings of IEEE Virtual Reality (VR'04)
Ruddle RA. 2004. The effect of environment characteristics and user interaction on levels of virtual environment sickness. IEEE Virtual Reality 2004 Conference
Ruddle RA. 2005. The effect of trails on first-time and subsequent navigation in a virtual environment. IEEE Virtual Reality 2005 Conference

Ruddle RA. 2005. Aiding and evaluating navigation. Proceedings of IEEE Virtual Reality Conference 2005 (VR'05)
Ruddle RA. 2005. The effect of trails on first-time and subsequent navigation in a virtual environment. Proceedings of IEEE Virtual Reality Conference 2005 (VR'05), March 12-16, 2005
Ruddle RA. 2005. Navigation: theoretical foundations and techniques for travel. Proceedings of IEEE Virtual Reality Conference 2005 (VR'05)
Ruddle RA. 2006. Using string-matching to analyze hypertext navigation. Proceedings of the 17th ACM Conference on Hypertext and Hypermedia (HT'06)

Ruddle RA. 2009. How do people find information on a familiar website?. People and Computers XXIII Celebrating People and Technology - Proceedings of HCI 2009
Ruddle RA. 2009. Finding Information Again Using An Individual’s Web History. Proceedings of the 23rd BCS Conference on Human-Computer Interaction (HCI'09)
Ruddle RA. 2010. INSPIRE: A new method of mapping information spaces. Proceedings of the International Conference on Information Visualisation

Ruddle RA, Bernard J, May T, Lücke-Tieke H, Kohlhammer J. 2016. Methods and a research agenda for the evaluation of event sequence visualization techniques. The Event Event: Temporal & Sequential Event Analysis - An IEEE VIS 2016 Workshop

Ruddle RA, Fateen W, Treanor D, Quirke P, Sondergeld P. 2013. Leveraging wall-sized high-resolution displays for comparative genomics analyses of copy number variation. 2013 IEEE Symposium on Biological Data Visualization (BioVis)

Ruddle RA, Huddart SA, Jones DM. 1999. Interaction in immersive virtual environments: Rotating objects with an instrumented prop. 43rd Annual Meeting of the Human-Factors-and-Ergonomics-Society

Ruddle RA, Lessels S. 2004. Three levels of metric for evaluating wayfinding. Proceedings of Virtual Reality Design and Evaluation Workshop
Ruddle RA, Savage JC, Jones DM. 1999. Effects of camera configurations on target observation that is performed from an uninhabited air vehicle. 43rd Annual Meeting of the Human-Factors-and-Ergonomics-Society

Ruddle RA, Savage JC, Jones DM. 2002. Verbal communication during cooperative object manipulation. Proceedings of the 4th International Conference on Collaborative Virtual Environments

Ruddle RA, Savage JC, Jones DM. 2002. Implementing flexible rules of interaction for object manipulation in cluttered virtual environments. Proceedings of the ACM Symposium on Virtual Reality Software and Technology

Santos P, Colton S, Magee DR. 2006. Predictive and Descriptive Approaches to Learning Game Rules from Vision Data.. Advances in Artificial Intelligence - IBERAMIA-SBIA 2006 2nd International Joint Conference, 10th Ibero-American Conference on AI

Santos P, Magee DR, Cohn AG. 2004. Looking for logic in vision. Proceedings Eleventh Workshop on Automated Reasoning
Santos PE, Magee DR, Cohn AG, Hogg DC. 2004. Combining multiple answers for learning mathematical structures from visual observation. ECAI 2004 Proceedings of the 16th European Conference on Artificial Intelligence, Valencia, Spain
Sarrami-Foroushani A, Lassila T, Pozo JM, Gooya A, Frangi AF. 2016. Direct estimation of wall shear stress from aneurysmal morphology: A statistical approach. Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2016

Shakhlevich NV. 2013. Scheduling divisible loads to optimize the computation time and cost. 10th International Conference (GECON 2013)

Shakhlevich NV, Shioura A, Strusevich VA. 2008. Fast divide-and-conquer algorithms for preemptive scheduling problems with controllable processing times – a polymatroid optimization approach. Proceedings of the 16th Annual European Symposium on Algorithms (ESA 2008)

Shakhlevich NV, Shioura A, Strusevich VA. 2008. Fast divide-and-conquer algorithms for preemptive scheduling problems with controllable processing times - A polymatroid optimization approach. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Shakhlevitch N. 2005. On some issues of inverse scheduling. Seventh Workshop on Models and Algorithms for Planning and Scheduling (MAPSP'05)
Shakhlevitch N, Strusevich VA. 2003. On two bicriteria scheduling problems with controllable processing times. Sixth Workshop on Models and Algorithms for Planning and Scheduling Problems (MAPSP'03)
Shioura A, Chakhlevitch NV, Strusevich VA. 2016. Handling Scheduling Problems with Controllable Parameters by Methods of Submodular Optimization. 9th International Conference, DOOR

Shioura A, Shakhlevich NV, Strusevich VA. 2015. Energy optimization in speed scaling models via submodular optimization. MAPS 2015

Shioura A, Shakhlevich NV, Strusevich VA. 2015. Scheduling imprecise computations on parallel machines with linear and nonlinear error penalties. MAPS 2015

Smith R, Xu J, Hima S, Johnson O. 2013. GATEway to the cloud: Case study: A privacy-aware environment for electronic health records research. IEEE 7th International Symposium on Service-Oriented System Engineering, SOSE 2013

Song Y, Brodlie KW, Bulpitt AJ. 2008. Efficient semi-automatic segmentation for creating patient specific models for virtual environments. 2nd MICCAI Workshop on Computer Vision for Intravascular and Intracardiac Imaging

Song Y, Bulpitt AJ, Brodlie KW. 2009. Liver Segmentation Using Automatically Defined Patient Specific B-Spline Surface Models. Medical Image Computing and Computer-Assisted Intervention – MICCAI 2009

Song Y, Luboz V, Din N, King D, Gould D, Bello F, Bulpitt AJ. 2011. Segmentation of 3D Vasculatures for Interventional Radiology Simulation.. Medecine Meets Virtual Reality 18

SOTSKOV YN, SHAKHLEVICH NV, ENGINEERS IE, ENGINEERS IE, ENGINEERS IE. 1994. AN ADAPTIVE APPROACH IN PRODUCTION SCHEDULING BASED ON THE MIXED GRAPH MODEL. SECOND INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS ENGINEERING
Sumpter N, Bulpitt AJ. 1998. Learning Spatio-Temporal Patterns for Predicting Object Behaviour.. BMVC 98 Proceedings of the 9th British Machine Vision Conference 1998, Vol. 2
Sumpter N, Bulpitt AJ, Vaughan RT, Tillett RD, Boyle RD. 1998. Learning Models of Animal Behaviour for a Robotic Sheepdog.. MVA
Sykes J, Brettle D, Magee D, Morgan A, Thwaites D. 2008. SU-GG-T-231: A Software Tool To Adapt The QUASAR Penta-Guide Phantom To Make An Additional Measurement Of Cone Beam CT Image Sharpness. Medical Physics

Tedder PMR, Bradford JR, Needham CJ, McConkey GA, Bulpitt AJ, Westhead DR. 2009. Bayesian data integration and enrichment analysis for predicting gene function in malaria.. Computability in Europe, CiE 2009
Vidal FP, Villard P-F, Holbrey R, John NW, Bello F, Bulpitt A, Gould DA. 2009. Developing An Immersive Ultrasound Guided Needle Puncture Simulator. MEDICINE MEETS VIRTUAL REALITY 17 - NEXTMED: DESIGN FOR/THE WELL BEING

Voliotis M, Molina-Paris C, Liverpool TB, Cohen N. 2006. Noise R Us: from gene regulatory networks to WWW. Proceedings of AISB'06: Adaptation in Artificial and Biological Systems
Weiß C, Knust S, Shakhlevich NV, Waldherr S. 2015. On the assignment problem with a nearly Monge matrix and its applications in scheduling. MAPS 2015

Westhead DR, Bulpitt AJ, Bradford JR, Needham CJ. 2006. Protein function prediction in Arabidopsis thaliana. Interdisciplinary Statistics and Bioinformatics
Wright AI, Magee D, Quirke P, Treanor D. 2016. Incorporating Local and Global Context for Better Automated Analysis of Colorectal Cancer on Digital Pathology Slides. 20th Conference on Medical Image Understanding and Analysis (MIUA 2016)

Zakkaroff C, Radjenovic A, Greenwood J, Magee D. 2012. Recovery of Slice Rotations with the Stack Alignment Transform in Cardiac MR Series. British Machine Vision Conference 2012

Zhu Y, Magee DR, Kessel D, Ratnalingam R. 2006. A virtual ultrasound imaging system for the simulation of ultrasound-guided needle insertion procedures. Proceedings of Medical Image Understanding and Analysis 2006
Zhu Y, Magee DR, Ratnalingam R, Kessel D. 2007. A training system for ultrasound-guided needle insertion procedures. Medical Image Computing and Computer Assisted Intervention - MICCAI 2007, 10th International Conference Proceedings

Zhu Y, Magee DR, Ratnalingam R, Kessel D. 2009. A Physics Based Method for Combining Multiple Anatomy Models with Application to Medical Simulation. Medicine Meets Virtual Reality
Çimen S, Gooya A, Ravikumar N, Taylor ZA, Frangi AF. 2016. Reconstruction of Coronary Artery Centrelines from X-Ray Angiography Using a Mixture of Student’s t-Distributions. 
Addis J, Mohammed N, Rotimi O, Magee D, Jha A, Subramanian V. 2016. Data associated with ’Raman spectroscopy of endoscopic colonic biopsies from patients with ulcerative colitis to identify mucosal inflammation and healing’. 
Ruddle RA, Thomas R, Randell R, Quirke P, Treanor D. 2015. The Design and Evaluation of Interfaces for Navigating Gigapixel Images in Digital Pathology. 
Addis J, Mohammed N, Rotimi O, Magee D, Jha A, Subramanian V. 2016. Raman spectroscopy of endoscopic colonic biopsies from patients with ulcerative colitis to identify mucosal inflammation and healing. Biomedical Optics Express. 2022-2022 7.
5

Almogy G, Cohen N, Stocker S, Stone L. 2002. Immune response and virus population composition: HIV as a case study. Proceedings of the Royal Society of London. Series B. Biological Sciences. 809-815 269.
1493

Appleby PA, Cohen N. 2010. A computational model of associative learning and chemotaxis in the nematode worm C. elegans. BMC Neuroscience. 11.
S1 
Ashley L, Jones H, Thomas J, Forman D, Newsham AC, Morris E, Johnson O, Velikova G, Wright P. 2011. Integrating cancer survivors’ experiences into UK cancer registries: design and development of the ePOCS system (electronic Patient-reported Outcomes from Cancer Survivors). British Journal of Cancer. S74-S81 105

Ayali A, Zilberstein Y, Cohen N. 2002. The locust frontal ganglion: a central pattern generator network controlling foregut rhythmic motor patterns. Journal of Experimental Biology. 2825-2832 205.
18 
Bennett B, Cohn AG, Magee DR. 2005. Enforcing global spatio-temporal consistency to enhance reliability of moving object tracking and classification. Künstliche Intelligenz. 32-35 2/2005
Bennett B, Magee DR, Cohn AG, Hogg DC. 2008. Enhanced tracking and recognition of moving objects by reasoning about spatio-temporal continuity. Image and Vision Computing. 67-81 26.
1

Bernus O, Radjenovic A, Trew M, LeGrice I, Sands G, Magee DR, Smaill B, Gilbert S. 2015. Comparison of diffusion tensor imaging by cardiovascular magnetic resonance and gadolinium enhanced 3D image intensity approaches to investigation of structural anisotropy in explanted rat hearts. Journal of Cardiovascular Magnetic Resonance. 1-27 17

Berri S, Boyle JH, Tassieri M, Hope IA, Cohen N. 2009. Forward locomotion of the nematode C. elegans is achieved through modulation of a single gait. HFSP Journal. 186-193 3.
3 
Berri S, Boyle JH, Tassieri M, Hope IA, Cohen N. 2009. C. elegans locomotion: a unified multidisciplinary perspective. BMC Neuroscience. 10.
S1 
Bewick BM, Rumball K, Birtwistle JC, Shaw JR, Johnson O, Raistrick D, Tober G. 2014. Developing a web-based intervention to increase motivation to change and encourage uptake of specialist face-to-face treatment by hospital inpatients: Change Drinking. Drug and Alcohol Review. 674-677 33.
6

Biglands J, Magee D, Boyle RD, Jerosch-Herold M, Larghat A, Plein S, Radjenovic A. 2010. Evaluation of the Effect of Myocardial Localisation
Errors on Myocardial Blood Flow Estimates from Myocardial Perfusion MRI. Journal of Cardiovascular Magnetic Resonance. 235+ 12.
Suppl. 1

Biglands J, Magee D, Boyle RD, Larghat A, Plein S, Radjenovic A. 2010. Evaluation of the effect of myocardial segmentation errors on myocardial blood flow estimates from DCE-MRI. Physics in Medicine and Biology. 2423-2443 56.
8 
Biglands J, Magee DR, Sourbron S, Plein S, Greenwood J, Radjenovic A. 2015. Comparison of the Diagnostic Performance of Four Quantitative Myocardial Perfusion Estimation Methods Used in Cardiac MR Imaging: CE-MARC Substudy. Radiology. 275.
2

Booth M, Treanor D, Roberts N, Magee DR, Speirs V, Hanby A. 2015. Three dimensional reconstruction of ductal carcinoma in situ using virtual slides. Histopathology. 966-973 66.
7

Booth ME, Nash CE, Roberts NP, Magee DR, Treanor D, Hanby AM, Speirs V. 2015. 3-D tissue modelling and virtual pathology as new approaches to study ductal carcinoma in situ.. Alternatives to Laboratory Animals. 377-383 43.
6 
Boyle JH, Berri S, Cohen N. 2012. Gait modulation in C. elegans: An integrated neuromechanical model. Frontiers in Computational Neuroscience. 6

Boyle JH, Berri S, Tassieri M, Hope IA, Cohen N. 2011. Gait Modulation in C. Elegans: It's Not a Choice, It's a Reflex!. Front Behav Neurosci. 10+ 5

Boyle JH, Cohen N. 2008. C. elegans body wall muscles are simple actuators. BioSystems. 170-181 94
Boyle JH, Cohen N. 2011. A minimal model of C. elegans forward locomotion: the larval L1 circuit. BMC Neuroscience. 12.
S1 
Bradford JR, Needham CJ, Bulpitt AJ, Westhead DR. 2006. Insights into Protein–Protein Interfaces using a Bayesian Network Prediction Method. Journal of Molecular Biology. 365-386 362.
2 
Bradford JR, Needham CJ, Tedder P, Care MA, Bulpitt AJ, Westhead DR. 2010. GO-At: In silico prediction of gene function in Arabidopsis thaliana by combining heterogeneous data. The Plant Journal. 713-721 61 
Brasel H, Shakhlevich N. 1998. On the solution region for certain scheduling problems with preemption. ANNALS OF OPERATIONS RESEARCH. 1-21 83 
Brown P, Toh E, Smith K, Jones P, Treanor D, Magee D, Burke D, Quirke P. 2015. New insights into the lymphovascular microanatomy of the colon and the risk of metastases in pT1 colorectal cancer obtained with quantitative methods and three-dimensional digital reconstruction. Histopathology. 167-175 67.
2

Brucker P, Chakhlevitch NV. 2016. Necessary and sufficient optimality conditions for scheduling unit time jobs on identical parallel machines. Journal of Scheduling. 659-685 19.
6

Brucker P, Cheng TCE, Knust S, Shakhlevitch N. 2004. Complexity results for shop problems with transportation delays. Annals of Operations Research. 81-106 129 
Brucker P, Knust S, Cheng TCE, Shakhlevich NV. 2004. Complexity Results for Flow-Shop and Open-Shop Scheduling Problems with Transportation Delays. Annals of Operations Research. 81-106 129.
1-4 
Brucker P, Shakhlevich NV. 2009. Inverse scheduling with maximum lateness objective. Journal of Scheduling. 475-488 12 
Brucker P, Shakhlevich NV. 2011. Inverse scheduling: two machine flow shop problem. Journal of Scheduling. 239-256 14.
3

Brucker P, Shakhlevich NV. 2011. A polynomial-time algorithm for a flow-shop batching problem with equal-length operations. Journal of Scheduling. 371-389 14.
4

Bruns F, Knust S, Chakhlevitch N. 2016. Complexity results for storage loading problems with stacking constraints. European Journal of Operational Research. 1074-1081 249.
3

Bryden JA, Cohen N. 2008. Neural control of Caenorhabditis elegans forward locomotion: the role of sensory feedback. Biological Cybernetics. 339-351 98

Bryden JA, Cohen N. 2008. Neural control of Caenorhabditis elegans forward locomotion: the role of sensory feedback. Biological Cybernetics. 339-351 98 
Bulpitt AJ, Berry E. 1998. Spiral CT of abdominal aortic aneurysms: Comparisons of segmentation with an automatic 3D deformable model and interactive segmentation. Proceedings - SPIE. 938-946 3338
Bulpitt AJ, Efford N. 1996. An efficient 3D deformable model with a self-optimising mesh.. Image Vis. Comput.. 573-580 14 
Care MA, Bradford JR, Needham CJ, Bulpitt AJ, Westhead DR. 2009. Combining the interactome and deleterious SNP predictions to improve disease gene identification. Human Mutation. 485-492 30(3) 
Care MA, Needham CJ, Bulpitt AJ, Westhead DR. 2007. Deleterious SNP prediction: be mindful of your training data!. Bioinformatics. 664-672 23.
6 
Cates M, Head D, Ajdari A. 2002. Rheological chaos in a scalar shear-thickening model. PRE. 66
Charles J, Pfister T, Magee D, Hogg D, Zisserman A. 2013. Domain Adaptation for Upper Body Pose Tracking in Signed TV Broadcasts. Procedings of the British Machine Vision Conference 2013. 
Cheng TCE, Chen ZL, Shakhlevitch N. 2002. Common due date assignment and scheduling with ready times. Computers & Operations Research. 1957-1967 29.
14 
Cheng TCE, Kovalyov MY, Shakhlevitch N. 2006. Scheduling with controllable release dates and processing times: Total completion time minimization. European Journal of Operational Research. 769-781+ 175
Cheng TCE, Kovalyov MY, Shakhlevitch N. 2006. Scheduling with controllable release dates and processing times: Makespan minimization. European Journal of Operational Research. 751-768 175.
2 
Cheng TCE, Shakhlevich N. 1999. Proportionate flow shop with controllable processing times. Journal of Scheduling. 253-265 2.6
Cheng TCE, Shakhlevitch N. 2003. Single machine scheduling of unit-time jobs with controllable release dates. Journal of Global Optimization. 293-311 27.
2-3 
Cheng TCE, Shakhlevitch N. 2005. Minimizing non-decreasing separable objective functions for the unit-time open shop scheduling problem. European Journal of Operational Research. 444-456 165 
Cheng TCE, Shakhlevitch N. 2007. Two-machine open shop problem with controllable processing times. Discrete Optimization. 175-184 4.
2 
Clark S, Koshy S, Zhang J, Cohen N, Nadeau J. 2008. Power and wavelength dependence of photoenhancement in (CdSe)ZnS-dopamine in aqueous solution and live cells. Zeitschrift fur Physikalische Chemie (International Journal of Research in Physical Chemistry & Chemical Physics). 851-863 222.
5-6 
Clarke EL, Mello-Thoms C, Magee D, Treanor D. 2016. A response to Campbell WS, Talmon GA, Foster KW, Lele SM, Kozel JA, West WW. Sixty-five thousand shades of gray: importance of color in surgical pathology diagnoses. HUM PATHOL 2015;6:1945-50.. Human Pathology. 204-205 56

Cohen N. 2005. From ionics to energetics in the nervous system. Solid State Ionics. 1661-1666 176

Cohen N, Boyle JH. 2010. Swimming at low Reynolds number: a beginners guide to undulatory locomotion. Contemporary Physics. 103-123 51.
2

Cohen N, Braunstein SL. 1995. Degenerate parametric amplifiers with a squeezed pump. Physical Review A. 815-829 52.
1 
Cohen N, Dagan T, Stone L, Graur D. 2005. GC composition of the human genome: in search of isochores. Molecular Biology and Evolution. 1260-1272 22.
5

Cohen N, Handley JW, Boyle RD, Braunstein S, Berry E. 2006. Experimental signature of registration noise in pulsed terahertz systems. Fluctuation and Noise Letters. L77-L84 6.
1 
Cohen N, Jordan J, Voliotis M. 2010. Preferential Duplication Graphs. J APPL PROBAB. 572-585 47.2
Cohen N, Jordan J, Voliotis M. 2010. Preferential duplication graphs. Journal of Applied Probability. 572-585 47.
02 
Cohen N, Sanders T. 2014. Nematode locomotion: dissecting the neuronal-environmental loop. Current Opinion in Neurobiology Fairhall A; Sompolinsky H (eds.). 99-106 25

Cohen N, Soen Y, Braun E. 1998. Spatio-temporal dynamics of networks of heart cells in culture. Physica A - Statistical and Theoretical Physics. 600-604 249.
1-4 
Condotta A, Knust S, Meier D, Shakhlevich NV. 2012. Tabu search and lower bounds for a combined production-transportation problem. Computers and Operations Research. 886-900 40.
3

Condotta A, Knust S, Shakhlevich NV. 2010. Parallel batch scheduling of equal-length jobs with release and due dates. Journal of Scheduling. 463-477 13 
Condotta A, Knust S, Shakhlevich NV. 2010. Parallel batch scheduling of equal-length jobs with release and due dates. Journal of Scheduling. 463-477 13.
5 
Condotta A, Shakhlevich NV. 2012. Scheduling coupled-operation jobs with exact time-lags. Discrete Applied Mathematics. 2370-2388 160 
Condotta A, Shakhlevich NV. 2014. Scheduling patient appointments via multilevel template: a case study in chemotherapy. Operations Research for Health Care. 129-144 3.
3

Danso S, Atwell ES, Johnson O, ten Asbroek A, Soromekun S, Edmond K, Hurt C, Hurt L, Zandoh C, Tawiah C, Fenty J, Etego S, Agyei S, Kirkwood B. 2013. A semantically annotated verbal autopsy corpus for automatic analysis of cause of death. ICAME Journal of the International Computer Archive of Modern and Medieval English. 37-69 37 
Danso SO, Atwell ES, Johnson O. 2013. A comparative study of machine learning methods for verbal autopsy text classification. IJCSI International Journal of Computer Science Issues. 10.
6 
Deckelnick K, Elliott CM, Ranner T. 2014. Unfitted finite element methods using bulk meshes for surface partial differential equations. SIAM Journal on Numerical Analysis. 2137-2162 52.
4

Dipon Ghosh D, Sanders T, Hong S, McCurdy LY, Chase DL, Cohen N, Koelle MR, Nitabach MN. 2016. Neural Architecture of Hunger-Dependent Multisensory Decision Making in C. elegans. Neuron. 1049-1062 92.
5

Dodds TJ, Ruddle RA. 2009. Using mobile group dynamics and virtual time to improve teamwork in large-scale collaborative virtual environments. COMPUTERS & GRAPHICS-UK. 130-138 33.
2

Dou Q, Wei L, Magee DR, Atkins PR, Chapman DN, Curioni G, Goddard KF, Hayati F, Jenks H, Metje N, Muggleton J, Pennock SR, Rustighi E, Swingler SG, Rogers CDF, Cohn AG. 2016. 3D Buried Utility Location Using A Marching-Cross-Section Algorithm for Multi-sensor Data Fusion. Sensors Li J (eds.). 16.
11

Dowding DW, Currie LM, Borycki E, Clamp S, Favela J, Fitzpatrick G, Gardner P, Hamer S, Hardiker N, Johnson O, Lawton R, O'Brien A, Randell R, Westbrook J, Whitewood-Moores Z, Dykes PC. 2013. International Priorities for Research in Nursing Informatics for Patient Care. MEDINFO 2013: PROCEEDINGS OF THE 14TH WORLD CONGRESS ON MEDICAL AND HEALTH INFORMATICS, PTS 1 AND 2. 372-376 192 
Elliott CM, Ranner T. 2015. A computational approach to an optimal partition problem on surfaces. Interfaces and Free Boundaries. 353-379 17.
3

Elliott CM, Ranner T. 2015. Evolving surface finite element method for the Cahn-Hilliard equation. Numerische Mathematik. 483-534 129.
3

Finlay S, Seedhom BB, Carey D, Bulpitt A, Treanor D, Kirkham J. 2016. In-vitro engineering of high modulus cartilage-like constructs.. Tissue engineering. Part C, Methods. 22.
4

Gill SA, Ruddle RA. 1998. Using virtual humans to solve real ergonomic design problems. IEE Conference Publication. 223-229457 
Glass CA, Shakhlevich NV. 2013. Minimising the number of gap-zeros in binary matrices. European Journal of Operational Research. 45-58 229.
1

Godfrey M, Johnson OA. 2009. Digital circles of support: Meeting the information needs of older people. Computers in Human Behavior. 633-642 25.
3

Gray NS, Fernandez M, Williams J, Ruddle RA, Snowden RJ. 2002. Which schizotypal dimensions abolish latent inhibition?. BRIT J CLIN PSYCHOL. 271-284 41
Gray NS, Williams J, Fernandez M, Ruddle RA, Good M, Snowden RJ. 2001. Context dependent latent inhibition in adult humans. Quarterly Journal of Experimental Psychology. 233-246 54.3
Handley JW, Cohen N, Boyle RD, Berry E. 2006. An empirical analysis of noise in pulsed terahertz systems. Fluctuation and Noise Letters. 65-76 6.
1

Head D. 2000. Phenomenological glass model for vibratory granular compaction. PRE. 2439-2449 62
Head D. 2000. Zero-temperature criticality in a simple glass model. Journal of Physics A: Mathematical and General. 465-478 33.
3 
Head D. 2000. Temperature scaling, glassiness and stationarity in the Bak-Sneppen model. The European Physical Journal B. 289-294 17.
2 
Head D. 2000. Extremal driving as a mechanism for generating long-term memory. Journal of Physics A: Mathematical and General. L387-L391 33.
42 
Head D. 2002. Universal persistence exponents in an extremally driven system. PRE. 65
Head D. 2003. Anomalous force diffusion in nearly ordered packings of frictionless discs. J Phys A. 6923-6933 36
Head D. 2004. First-order rigidity transition and multiple stability regimes for random networks with internal stresses. J Phys A. 10771-10778 37
Head D. 2005. Mean-field description of jamming in noncohesive frictionless particulate systems. PRE. 72
Head D. 2006. Volume-controlled buckling of thin elastic shells: application to crusts formed on evaporating partially wetted droplets. Journal of Physics : Condensed Matter. L485-L491 18
Head D. 2006. Modeling the elastic deformation of polymer crusts formed by sessile droplet evaporation. Physical Review E. 74
Head D. 2007. Well defined transition to gel-like aggregates of attractive athermal particles. EPJE. 151-155 22
Head D. 2016. Biomechanical Analysis of Infectious Biofilms.. Advances in Experimental Medicine and Biology. 99-114 915

Head D, Ajdari A, Cates M. 2001. Jamming, hysteresis, and oscillation in scalar models for shear thickening. PRE. 6406
Head D, Ajdari A, Cates M. 2002. Rheological instability in a simple shear-thickening model. PRE. 120-126 57
Head D, Levine A, Mackintosh F. 2003. Distinct regimes of elastic response and deformation modes of cross-linked cytoskeletal and semiflexible polymer networks. PRE. 68
Head D, Levine A, Mackintosh F. 2003. Deformation of cross-linked semiflexible polymer networks. PRL. 91
Head D, Levine A, Mackintosh F. 2005. Mechanical response of semiflexible networks to localized perturbations. Physical Review E. 72
Head D, Mackintosh F, Levine A. 2003. Nonuniversality of elastic exponents in random bond-bending networks. PRE. 68
Head D, Mizuno D. 2010. Nonlocal fluctuation correlations in active gels. Physical Review E. 81.
4

Head D, Rodgers G. 1996. Kinetics of catalysis with surface disorder. Physical Review E. 1101-1105 54
Head D, Rodgers G. 1997. Speciation and extinction in a simple model of evolution. Physical Review E. 3312-3319 55
Head D, Rodgers G. 1997. Crossover to self-organized criticality in an inertial sandpile model. Physical Review E. 2573-2579 55
Head D, Rodgers G. 1997. Slowly driven sandpile formation with granular mixtures. Physical Review E. 1976-1980 56
Head D, Rodgers G. 1998. A coarse-grained model for granular compaction and relaxation. Physical Review E. 107-122 31
Head D, Rodgers G. 1998. The anisotropic Bak-Sneppen model. J Phys A. 3977-3988 31
Head D, Rodgers G. 1999. Stretched exponentials and power laws in granular avalanching. J Phys A. 1387-1393 32
Head D, Tkachenko A, Witten T. 2001. Robust propagation direction of stresses in a minimal granular packing. EPJE. 99-105 6
Head D, Tkachenko A, Witten T. 2002. Reply to the Comment by J.N. Roux on "Robust propagation direction of stresses in a minimal granular packing". EPJE. 299-300 7
Head DA. 2009. Critical scaling and aging in cooling systems near the jamming transition. Physical Review Letters. 102.
13

Head DA. 2013. Linear surface roughness growth and flow smoothening in a three-dimensional biofilm model. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics. 88.
3

Head DA, Ajdari A, Cates ME. 2001. Jamming, hysteresis, and oscillation in scalar models for shear thickening. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64.6 I
Head DA, Briels W, Gompper G. 2011. Spindles and active vortices in a model of confined filament-motor mixtures. BMC Biophysics. 4

Head DA, Briels WJ, Gompper G. 2014. Nonequilibrium structure and dynamics in a microscopic model of thin-film active gels. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics. 89.
3

Head DA, Gompper G, Briels WJ. 2011. Microscopic basis for pattern formation and anomalous transport in two-dimensional active gels. Soft Matter. 3116-3126 7

Head DA, Ikebe E, Nakamasu A, Zhang P, Villaruz LG, Kinoshita S, Ando S, Mizuno D. 2014. High-frequency affine mechanics and nonaffine relaxation in a model cytoskeleton. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics. 89.
4

Head DA, Levine AJ, MacKintosh FC. 2003. Distinct regimes of elastic response and deformation modes of cross-linked cytoskeletal and semiflexible polymer networks. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 619071-6190715 68.6 1
Head DA, MacKintosh FC, Levine AJ. 2003. Nonuniversality of elastic exponents in random bond-bending networks. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 68.2 2
Head DA, Marsh PD, Devine DA. 2014. Non-lethal control of the cariogenic potential of an agent-based model for dental plaque. PLoS ONE. 9.
8

Head DA, Mizuno D. 2013. Local mechanical response in semiflexible polymer networks subjected to an axisymmetric prestress. Physical Review E: Statistical, Nonlinear, and Soft Matter Physics. 88.
2

Head DA, Tanaka H. 2010. Superdiffusive mass transport as a causal mechanism for large-scale structure formation. EPL. 91

Head DA, Tronci G, Russell SJ, Wood DJ. 2016. In Silico Modeling of the Rheological Properties of Covalently Cross-Linked Collagen Triple Helices. ACS Biomaterials Science & Engineering. 1224-1233 2.
8

Hina S, Atwell ES, Johnson O. 2010. Semantic tagging of medical narratives with top level concepts from SNOMED CT healthcare data standard. International Journal of Intelligent Computing Research (IJICR). 118-123 1.3
Hutchins GGA, Randell R, Sandars J, Ambepitiya T, Thomas RG, Ruddle RA, Quirke P, Treanor D. 2012. Undergraduate Histopathology Teaching Using a High-resolution Wall-sized Virtual Microscope. JOURNAL OF PATHOLOGY. S19-S19 228
Johnson OA, Fraser HSF, Wyatt JC, Walley JD. 2014. Electronic health records in the UK and USA. The Lancet. 954-954 384.
9947

Johnson OA, Hall PS, Hulme C. 2016. NETIMIS: Dynamic Simulation of Health Economics Outcomes Using Big Data. PharmacoEconomics. 107-114 34.
2

Jones RG. 2013. Learning lessons from a hidden success of the NHS national programme for IT. BMJ. f4991-f4991 347.
aug09 2 
Jones RG, Johnson C, Curran M, Johnson O, Croal B. 2013. ENGLAND'S NATIONAL PROGRAMME FOR IT Learning lessons from a hidden success of the NHS national programme for IT. BMJ-BRITISH MEDICAL JOURNAL. 347 
Jones RG, Johnson OA, Batstone G. 2014. Informatics and the clinical laboratory.. Clinical Biochemist Reviews. 177-192 35.
3 
Kengyelics SM, Gislason-Lee AJ, Keeble C, Magee DR, Davies AG. 2015. Context sensitive cardiac x-ray imaging: a machine vision approach to x-ray dose control. Journal of Electronic Imaging. 24.
5

Kengyelics SM, Gislason-Lee AJ, Keeble C, Magee DR, Davies AG. 2016. Noise estimation in cardiac x-ray imaging: a machine vision approach. Biomedical Physics and Engineering Express. 2.
6

Khan AM, Rajpoot N, Treanor D, Magee DR. 2014. A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution. IEEE Transactions on Biomedical Engineering. 1729-1738 61.
6

King SF, Johnson OA. 2006. VBP: An Approach to Modelling Process Variety and Best Practice. Information and Software Technology. 1104-1114 48 
Kloepfer JA, Cohen N, Nadeau JL. 2004. FRET between CdSe quantum dots in lipid vesicles and water- and lipid-soluble dyes. Journal of Physical Chemistry: B. 17042-17049 108.
44

Kraima AC, West NP, Treanor D, Magee D, Roberts N, Van de Velde CJ, DeRuiter MC, Quirke P, Rutten HJT. 2016. The anatomy of the perineal body in relation to abdominoperineal excision for low rectal cancer. Colorectal Disease. 688-695 18.
7

Kraima AC, West NP, Treanor D, Magee DR, Bleys RLAW, Rutten HJT, van de Velde CJH, Quirke P, DeRuiter MC. 2015. Understanding the surgical pitfalls in total mesorectal excision: Investigating the histology of the perirectal fascia and the pelvic autonomic nerves. EJSO - European Journal of Surgical Oncology. 1621-1629 41.
12

Kraima AC, West NP, Treanor D, Magee DR, Rutten HJ, Quirke P, Deruiter MC, Van De Velde CJH. 2015. Whole mount microscopic sections reveal that Denonvilliers' fascia is one entity and adherent to the mesorectal fascia; Implications for the anterior plane in total mesorectal excision?. European Journal of Surgical Oncology. 738-745 41.
6

Krüger K, Shakhlevich NV, Sotskov YN, Werner F. 1995. A heuristic decomposition algorithm for scheduling problems on mixed graphs. Journal of the Operational Research Society. 1481-1497 46.
12 
Lange M, Di Marco LY, Lekadir K, Lassila T, Frangi AF. 2016. Protective Role of False Tendon in Subjects with Left Bundle Branch Block: A Virtual Population Study. PLOS ONE Rodriguez B (eds.). e0146477-e0146477 11.
1

Lassila T. 2009. Optimal damping of a membrane and topological shape optimization. Structural and Multidisciplinary Optimization. 43-52 38.
1 
Lassila T, Manzoni A, Quarteroni A, Rozza G. 2013. Generalized reduced basis methods and n-width estimates for the approximation of the solution manifold of parametric PDEs. Bollettino dell'Unione Matematica Italiana. 113-136 6.1
Lassila T, Manzoni A, Quarteroni A, Rozza G. 2013. Boundary control and shape optimization for the robust design of bypass anastomoses under uncertainty. ESAIM: Mathematical Modelling and Numerical Analysis. 1107-1131 47.
4 
Lassila T, Manzoni A, Quarteroni A, Rozza G. 2013. A reduced computational and geometrical framework for inverse problems in hemodynamics. International Journal for Numerical Methods in Biomedical Engineering. 741-776 29.
7 
Lassila T, Manzoni A, Rozza G. 2012. On the approximation of stability factors for general parametrized partial differential equations with a two-level affine decomposition. ESAIM: Mathematical Modelling and Numerical Analysis. 1555-1576 46.
6 
Lassila T, Quarteroni A, Rozza G. 2012. A Reduced Basis Model with Parametric Coupling for Fluid-Structure Interaction Problems. SIAM Journal on Scientific Computing. A1187-A1213 34.
2 
Lassila T, Rozza G. 2010. Parametric free-form shape design with PDE models and reduced basis method. Computer Methods in Applied Mechanics and Engineering. 1583-1592 199.
23-24 
Lassila T, Rozza G. 2011. Model reduction of semiaffinely parameterized partial differential equations by two-level affine approximation. Comptes Rendus Mathematique. 61-66 349.
1-2 
Lea A, Pearson D, Clamp S, Johnson O, Jones R. 2008. Undergraduate Learning. Education for Primary Care. 656-659 19.
6 
Lea A, Pearson D, Clamp S, Johnson OA, Jones R. 2008. Using the electronic medical record within medical undergraduate education. Education for Primary Care. 656-659 19.
6 
Lessels S, Ruddle RA. 2005. Movement around real and virtual cluttered environments. Presence: Teleoperators and Virtual Environments. 580-596 14

Lessels S, Ruddle RA. 2006. Three levels of metric for evaluating wayfinding. Presence: Teleoperators and Virtual Environments. 637-654 15 
Levine A, Head D, Mackintosh F. 2004. The deformation field in semiflexible networks. J PHYS-CONDENS MAT. S2079-S2088 16
Li SS, Brucker P, Ng CT, Shakhlevich NV, Yuan JJ. 2013. A note on reverse scheduling with maximum lateness objective. Journal of Scheduling. 417-422 16

Liang Y, Wang F, Treanor D, Magee DR, Roberts N, Teodoro G, Zhu Y, Kong J. 2016. A framework for 3D vessel analysis using whole slide images of liver tissue sections. International Journal of Computational Biology and Drug Design. 102-119 9.
1/2

Luboz V, Zhang Y, Johnson S, Song Y, Kilkenny C, Hunt C, Woolnough H, Guediri S, Zhai J, Odetoyinbo T, Littler P, Fisher A, Hughes C, Chalmers N, Kessel D, Clough PJ, Ward J, Phillips R, How T, Bulpitt AJ, John NW, Bello F, Gould D. 2013. ImaGiNe Seldinger: first simulator for Seldinger Technique and Angiography Training. Computer Methods and Programs in Biomedicine. 419-434 111.
2

Magee DR. 2004. Tracking multiple vehicles using foreground, background and motion models. Image and Vision Computing. 143-155 22.
2 
Magee DR, Boyle RD. 2002. Detecting lameness using 're-sampling condensation' and 'multi-stream cyclic hidden Markov models'. Image and Vision Computing. 581-594 20.
8 
Magee DR, Pers J. 2009. Computer vision based analysis in sport environments.. Comput. Vis. Image Underst.. 589-589 113 
Magee DR, Song Y, Gilbert S, Roberts N, Wijayathunga N, Wilcox R, Bulpitt AJ, Treanor D. 2015. Histopathology in 3D: from three-dimensional reconstruction to multi-stain and multi-modal analysis. Journal of Pathology Informatics. 6.
6

Magee DR, Zhu Y, Ratnalingam R, Gardner PH, Kessel D. 2007. An augmented reality simulator for ultrasound guided needle placement training. Medical & Biological Engineering & Computing. 957-967 45.
10

Manzoni A, Pagani S, Lassila T. 2016. Accurate Solution of Bayesian Inverse Uncertainty Quantification Problems Combining Reduced Basis Methods and Reduction Error Models. SIAM/ASA Journal on Uncertainty Quantification. 380-412 4.
1

Marsh PD, Head DA, Devine D. 2015. Dental plaque as a biofilm and a microbial community—Implications for treatment. Journal of Oral Biosciences. 185-191 57.
4

Marsh PD, Head DA, Devine DA. 2014. Prospects of oral disease control in the future - an opinion. Journal of oral microbiology. 26176-26176 6

Marsh PD, Head DA, Devine DA. 2015. Ecological Approaches to Oral Biofilms: Control without Killing.. Caries research. 46-54 49 Suppl 1

McCarthy R, Orsi NM, Treanor D, Moran O, Vernooij M, Magee DR, Roberts N, Stahlschmidt J, Simpson NAB. 2016. Three-dimensional digital reconstruction of human placental villus architecture in normal and complicated pregnancies.. Eur J Obstet Gynecol Reprod Biol. 130-135 197

McGrath DM, Ravikumar N, Wilkinson ID, Frangi AF, Taylor ZA. 2016. Magnetic resonance elastography of the brain: An in silico study to determine the influence of cranial anatomy. Magnetic Resonance in Medicine. 645-662 76 
Mizuno D, Bacabac R, Tardin C, Head D, Schmidt CF. 2009. High-resolution probing of cellular force transmission. Physical Review Letters. 102.
16

Mizuno D, Head DA, MacKintosh FC, Schmidt CF. 2008. Active and passive microrheology in equilibrium and nonequilibrium systems. Macromolecules. 7194-7202 41.
19 
Nathan PA, Johnson O, Clamp S, Wyatt JC. 2016. Time to rethink the capture and use of family history in primary care. British Journal of General Practice. 627-628 66.
653

Needham CJ, Bradford JR, Bulpitt AJ, Care MA, Westhead DR. 2006. Predicting the effect of missense mutations on protein function: analysis with Bayesian networks. BMC Bioinformatics. 1-14 7.
1

Needham CJ, Bradford JR, Bulpitt AJ, Westhead DR. 2006. Inference in Bayesian networks. Nature Biotechnology. 51-53 24 
Needham CJ, Bradford JR, Bulpitt AJ, Westhead DR. 2007. A primer on learning in Bayesian networks for computational biology. PLoS Computational Biology. 1409-1416 3.
8

Needham CJ, Manfield IW, Bulpitt AJ, Gilmartin PM, Westhead DR. 2009. From gene expression to gene regulatory networks in Arabidopsis thaliana. BMC Systems Biology. 3:85

Needham CJ, Santos PE, Magee DR, Devin VE, Hogg DC, Cohn AG. 2005. Protocols from perceptual observations. Artificial Intelligence. 103-136 167.
1-2 
Netta C. 2012. The worm turns: neural control of nematode locomotion. Frontiers in Behavioral Neuroscience. 6 
Pickering SJ, Bulpitt AJ, Efford ND, Gold ND, Westhead DR. 2001. AI-based algorithms for protein surface comparisons. Computers & Chemistry. 79-84 26.
1 
Pretorius AJ, Bray MA, Carpenter AE, Ruddle RA. 2011. Visualization of parameter space for image analysis. IEEE Transactions on Visualization and Computer Graphics. 2402-2411 17.
12

Pretorius AJ, Zhou Y, Ruddle RA. 2015. Visual parameter optimisation for biomedical image processing. BMC Bioinformatics. 16.
S11

Randell R, Ambepitiya T, Mello-Thoms C, Ruddle RA, Brettle D, Thomas RG, Treanor D. 2015. Effect of display resolution on time to diagnosis with virtual pathology slides in a systematic search task. Journal of Digital Imaging. 68-76 28.
1

Randell R, Ruddle RA, Mello-Thoms C, Thomas RG, Quirke P, Treanor D. 2013. Virtual reality microscope versus conventional microscope regarding time to diagnosis: an experimental study.. Histopathology. 351-358 62.
2

Randell R, Ruddle RA, Quirke P, Thomas RG, Treanor D. 2012. Working at the microscope: analysis of the activities involved in diagnostic pathology.. Histopathology. 504-510 60.
3

Randell R, Ruddle RA, Thomas R, Treanor D. 2012. Diagnosis at the microscope: A workplace study of histopathology. Cognition, Technology and Work. 319-335 14.
4

Randell R, Ruddle RA, Thomas RG, Mello-Thoms C, Treanor D. 2014. Diagnosis of major cancer resection specimens with virtual slides: Impact of a novel digital pathology workstation. Human Pathology. 2101-2106 45.
10

Randell R, Ruddle RA, Thomas RG, Treanor D. 2015. Response to Rojo and Bueno: “Analysis of the impact of high resolution monitors in digital pathology”. Journal of Pathology Informatics. 6

Randell RS, Ruddle RA, Treanor D. 2015. Barriers and facilitators to the introduction of digital pathology for diagnostic work. Studies in Health Technology and Informatics. 443-447 216

Ranner T, Elliott CM. 2013. Finite element analysis for a coupled bulk–surface partial differential equation. IMA Journal of Numerical Analysis. 377-402 33.
2

Ravikumar N, Noble C, Cramphorn E, Taylor ZA. 2015. A constitutive model for ballistic gelatin at surgical strain rates. Journal of the Mechanical Behavior of Biomedical Materials. 87-94 47

Rizzi L, Head DA, Auer S. 2015. Universality in the morphology and mechanics of coarsening amyloid fibril networks. Physical Review Letters. 114.
7

Rizzi LG, Auer S, Head DA. 2016. Importance of non-affine viscoelastic response in disordered fibre networks. SOFT MATTER. 4332-4338 12.
19

Roberts N, Magee D, Song Y, Brabazon K, Shires M, Crellin D, Orsi N, Quirke R, Quirke P, Treanor D. 2012. Towards Routine Use of 3D Histopathology As a Research Tool. American Journal of Pathology. 1835-1842 180.
5

Rochel O, Cohen N. 2007. Learning through activity-dependent plasticity modulation. BMC Neuroscience. 8.
S2 
Rochel ORL, Cohen N. 2007. Real time computation: zooming in on population codes. BioSystems. 260-266 87 
Rossi S, Lassila T, Ruiz-Baier R, Sequeira A, Quarteroni A. 2014. Thermodynamically consistent orthotropic activation model capturing ventricular systolic wall thickening in cardiac electromechanics. European Journal of Mechanics - A/Solids. 129-142 48

Roux J-N. 2002. .
The European Physical Journal E. 297-298 7.
3 
Ruddle RA. 2000. Navigating overlapping virtual worlds: Arriving in one place and finding that you're somewhere else. SPATIAL COGNITION II. 333-347 1849
Ruddle RA. 2008. Generating trails automatically, to aid navigation When you revisit an environment. PRESENCE-TELEOP VIRT. 562-574 17.
6 
Ruddle RA, Howes A, Payne SJ, Jones DM. 2000. Effects of hyperlinks on navigation in virtual environments. International Journal of Human Computer Studies. 551-581 53.
4

Ruddle RA, Jones DM. 2001. Movement in cluttered virtual environments. PRESENCE-TELEOP VIRT. 511-524 10.
5 
Ruddle RA, Jones DM. 2001. Manual and virtual rotation of a three-dimensional object.. J Exp Psychol Appl. 286-296 7.4
Ruddle RA, Lessels S. 2006. For efficient navigational search, humans require full physical movement, but not a rich visual scene. Psychological Science. 460-465 17.
6 
Ruddle RA, Lessels S. 2009. The benefits of using a Walking interface to navigate virtual environments. ACM T COMPUT-HUM INT. 16.
1

Ruddle RA, Payne SJ, Jones DM. 1997. Navigating Buildings in "Desk-Top" Virtual Environments: Experimental Investigations Using Extended Navigational Experience. Journal of Experimental Psychology: Applied. 143-159 3.
2 
Ruddle RA, Payne SJ, Jones DM. 1998. Navigating large-scale "desk-top" virtual buildings: Effects of orientation aids and familiarity. Presence: Teleoperators and Virtual Environments. 179-192 7.
2

Ruddle RA, Payne SJ, Jones DM. 1999. The effects of maps on navigation and search strategies in very-large-scale virtual environments. Journal of Experimental Psychology: Applied. 54-75 5.
1

Ruddle RA, Payne SJ, Jones DM. 1999. Navigating large-scale virtual environments: What differences occur between helmet-mounted and desk-top displays?. Presence: Teleoperators and Virtual Environments. 157-168 8.
2

Ruddle RA, Peruch P. 2004. Effects of proprioceptive feedback and environmental characteristics on spatial learning in virtual environments. INT J HUM-COMPUT ST. 299-326 60.
3 
Ruddle RA, Savage JC, Jones DM. 2002. Symmetric and asymmetric action integration during cooperative object manipulation in virtual environments. ACM Transactions on Computer - Human Interaction. 285-308 9.4
Ruddle RA, Savage JC, Jones DM. 2002. Symmetric and asymmetric action integration during cooperative object manipulation in virtual environments. ACM Transactions on Computer - Human Interaction. 285-308 9.
4

Ruddle RA, Savage JC, Jones DM. 2003. Levels of control during a collaborative carrying task. Presence: Teleoperators and Virtual Environments. 140-155 12.
2

Ruddle RA, Savage JCD, Jones DM. 2002. Evaluating rules of interaction for object manipulation in cluttered virtual environments. PRESENCE-TELEOP VIRT. 591-609 11.
6 
Ruddle RA, Thomas RG, Randell R, Quirke P, Treanor D. 2016. The design and evaluation of interfaces for navigating gigapixel images in digital pathology. ACM Transactions on Computer-Human Interaction. 23.
1

Ruddle RA, Thomas RG, Randell RS, Quirke P, Treanor D. 2015. Performance and interaction behaviour during visual search on large, high-resolution displays.. Information Visualization. 137-147 14.
2

Ruddle RA, Volkova E, Buelthoff HH. 2013. Learning to Walk in Virtual Reality. ACM Transactions on Applied Perception. 10.
2

Ruddle RA, Volkova E, Bulthoff HH. 2011. Walking improves your cognitive map in environments that are large-scale and large in extent. ACM Transactions on Computer - Human Interaction. 18.
2

Ruddle RA, Volkova E, Mohler B, Bülthoff HH. 2011. The effect of landmark and body-based sensory information on route knowledge. Memory and Cognition. 686-699 39.
4

Sanders T, Cohen N. 2012. Understanding plasticity of chemotaxis in C. elegans, a computational model of associative learning. BMC Neuroscience. 13.
S1 
Sanders T, Cohen N. 2013. Exploring minimal models of sensory integration in nematode C. elegans. BMC Neuroscience. 14.
S1 
Santos P, Needham CJ, Magee D. 2008. Inductive learning spatial attention. Revista Controle & Automacao. 316-326 19 
Sarrami-Foroushani A, Lassila T, Gooya A, Geers AJ, Frangi AF. 2016. Uncertainty quantification of wall shear stress in intracranial aneurysms using a data-driven statistical model of systemic blood flow variability. Journal of Biomechanics. 3815-3823 49.
16

Segev R, Beneviste M, Hulata E, Cohen N, Palevski A, Kapon E, Shapira Y, Ben-Jacob E. 2002. Long term behavior of lithographically prepared in vitro neuronal networks. Physical Review Letters. pp.118102+ 88.
11

Shakhlevich N, Hoogeveen H, Pinedo M. 1998. Minimizing total weighted completion time in a proportionate flow shop. Journal of Scheduling. 157-168 1.
3 
Shakhlevich NV. 2005. Open shop unit-time scheduling problems with symmetric objective functions. 4OR. 117-131 3.
2 
Shakhlevich NV, Shioura A, Strusevich VA. 2009. Single machine scheduling with controllable processing times by submodular optimization. International Journal of Foundations of Computer Science. 247-269 20

Shakhlevich NV, Sotskov YN. 1994. Scheduling two jobs with fixed and nonfixed routes. Computing. 17-30 52.
1 
Shakhlevich NV, Sotskov YN, Werner F. 1996. Adaptive scheduling algorithm based on mixed graph model. IEE Proceedings - Control Theory and Applications. 9-16 143.
1 
Shakhlevich NV, Sotskov YN, Werner F. 1999. Shop-scheduling problems with fixed and non-fixed machine orders of the jobs. ANNALS OF OPERATIONS RESEARCH. 281-304 92 
Shakhlevich NV, Sotskov YN, Werner F. 2000. Complexity of mixed shop scheduling problems: A survey. European Journal of Operational Research. 343-351 120.
2 
Shakhlevich NV, Strusevich VA. 1993. Two machine open shop scheduling problem to minimize an arbitrary machine usage regular penalty function. European Journal of Operational Research. 391-404 70.
3 
Shakhlevich NV, Strusevich VA. 2008. Preemptive scheduling on uniform parallel machines with controllable job processing times. Algorithmica. 451-473 51

Shakhlevitch N. 2005. Unit-time open-shop scheduling problems with symmetric objective functions. 4OR: Quarterly Journal of the Belgian, French and Italian Operations Research Societies. 117-131 3
Shakhlevitch N, Strusevich VA. 2005. Pre-emptive scheduling problems with controllable processing times. Journal of Scheduling. 233-253 8.
3 
Shakhlevitch N, Strusevich VA. 2006. Single machine scheduling with controllable release and processing parameters. Discrete Applied Mathematics. 2178-2199 154.
15 
Shioura A, Shakhlevitch N, Strusevich VA. 2015. Decomposition algorithms for submodular optimization with applications to parallel machine scheduling with controllable processing times. Mathematical Programming. 495-534 153.
2

Shioura A, Shakhlevitch N, Strusevich VA. 2016. Application of Submodular Optimization to Single Machine Scheduling with Controllable Processing Times Subject to Release Dates and Deadlines. Informs Journal on Computing. 148-161 28.
1

Shioura A, Strusevich VA, Shakhlevich NV. 2013. A submodular optimization approach to bicriteria scheduling problems with controllable processing times on parallel machines. SIAM Journal on Discrete Mathematics. 186-204 27.
1

Skyes JR, Brettle DS, Magee DR, Thwaites DI. 2009. Investigation of uncertainties in image registration of cone beam CT to CT on an image-guided radiotherapy system. Physics in Medicine and Biology. 7263-7283 54 
Snowden RJ, Stimpson N, Ruddle RA. 1998. Speed perception fogs up as visibility drops.. Nature. 450+ 392.
6675 
Soen Y, Cohen N, Braun E. 1999. Emergence of spontaneous complex dynamics in self-assembled networks of heart cells. Biophysical Journal. A268+ 76
Soen Y, Cohen N, Braun E, Lipson D. 1999. Emergence of spontaneous rhythm disorders in self-assembled networks of heart cells. Physical Review Letters. 3556-3559 82 
Song Y, Treanor D, Bulpitt AJ, Magee DR. 2013. 3D reconstruction of multiple stained histology images.. Journal of Pathology Informatics. 1-5 4.
Supplement

Song Y, Treanor D, Bulpitt AJ, Wijayathunga N, Roberts N, Wilcox R, Magee DR. 2014. Unsupervised Content Classification Based Nonrigid Registration of Differently Stained Histology Images. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING. 96-108 61.
1

Sotskov Y, Shakhlevich NV. 1995. NP-hardness of shop-scheduling problems with three jobs. Discrete Applied Mathematics. 237-266 59.
3 
SOTSKOV YN, SHAKHLEVICH NV. 1991. ADAPTIVE ALGORITHM FOR MINIMIZING TOTAL REQUEST SERVICING TIME BY SERIAL DEVICES. SOVIET JOURNAL OF COMPUTER AND SYSTEMS SCIENCES. 43-47 29.6
SOTSKOV YN, SHAKHLEVICH NV. 1995. NP-HARDNESS OF SHOP-SCHEDULING PROBLEMS WITH 3 JOBS. DISCRETE APPLIED MATHEMATICS. 237-266 59.
3 
Strusevich V, Drobouchevitch IG, Shakhlevich NV. 2002. Three-machine shop scheduling with partially ordered processing routes. JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY. 574-582 53.
5 
Strusevich VA, Drobouchevitch IG, Shakhlevitch N. 2002. Three-machine shop scheduling with partially ordered processing routes. Journal of the Operational Research Society. 574-582 53.
5 
STRUSEVICH VA, SHAKHLEVICH NV. 1993. OPTIMAL JOB-SHOP SCHEDULING WITH 2 JOBS IN SYSTEMS WITH UNRESTRICTED PATHS. COMPUTATIONAL MATHEMATICS AND MATHEMATICAL PHYSICS. 593-601 33.5
Sumpter N, Bulpitt AJ. 2000. Learning spatio-temporal patterns for predicting object behaviour.. Image Vis. Comput.. 697-704 18 
Sykes JR, Lindsay R, Dean CJ, Brettle DS, Magee DR, Thwaites DI. 2008. Measurement of cone beam CT coincidence with megavoltage isocentre and image sharpness using the QUASAR Penta-Guide phantom.. Phys Med Biol. 5275-5293 53.
19 
Tedder P, Bradford J, McConkey G, Bulpitt AJ, Westhead D. 2010. PlasmoPredict: A gene function prediction website for Plasmodium falciparum. Trends in Parasitology. 
Tedder PMR, Bradford JR, Needham CJ, McConkey GA, Bulpitt AJ, Westhead DR. 2010. Gene function prediction using semantic similarity clustering and enrichment analysis in the malaria parasite Plasmodium falciparum.. Bioinformatics. 2431-2437 26.
19 
Toyota T, Head DA, Schmidt CF, Mizuno D. 2011. Non-Gaussian athermal fluctuations in active gels. Soft Matter. 3234-3239 7

Treanor D, Jordan-Owers N, Hodrien J, Wood J, Quirke P, Ruddle RA. 2009. Virtual reality Powerwall versus conventional microscope for viewing pathology slides: an experimental comparison. Histopathology. 294-300 55.
3

Treanor D, Lim C, Magee D, Bulpitt AJ, Quirke P. 2009. Tracking with virtual slides: a tool to study diagnostic error in histopathology. Histopathology. 37-45 55.
1

Vergara C, Lange M, Palamara S, Lassila T, Frangi AF, Quarteroni A. 2016. A coupled 3D–1D numerical monodomain solver for cardiac electrical activation in the myocardium with detailed Purkinje network. Journal of Computational Physics. 218-238 308

Villard PF, Vidal FP, ap Cenydd L, Holbrey R, Pisharody S, Johnson S, Bulpitt A, John NW, Bello F, Gould D. 2014. Interventional radiology virtual simulator for liver biopsy. International Journal of Computer Assisted Radiology and Surgery. 255-267 9.
2

Voliotis M, Cohen N, Molina-Paris C, Liverpool T. 2009. Backtracking and proofreading in DNA transcription. Physical Review Letters. 102 
Voliotis M, Cohen N, Molina-Paris C, Liverpool TB. 2008. Fluctuations, pauses and backtracking in DNA transcription. Biophysical Journal. 334-338 94
Voliotis M, Cohen N, Molina-París C, Liverpool TB. 2012. Proofreading of misincorporated nucleotides in DNA transcription.. Phys Biol. 036002+ 9.
3 
Voliotis M, Cohen N, Molina-París C, Liverpool TB. 2012. Proofreading of misincorporated nucleotides in DNA transcription. Physical Biology. 9.
3

Waddington A, Appleby PA, de Kamps M, Cohen N. 2012. Triphasic Spike-Timing-Dependent Plasticity Organizes Networks to Produce Robust Sequences of Neural Activity. Frontiers in Computational Neuroscience. 6

Waddington A, Appleby PA, deKamps M, Cohen N. 2011. Emergence of synfire chains with triphasic spike-time-dependent plasticity. BMC Neuroscience. 12.
S1 
Waddington A, Cohen N. 2009. Capacity of networks to develop multiple attractors through STDP. BMC Neuroscience. 10.
S1 
Weiß C, Knust S, Shakhlevitch NV, Waldherr S. 2016. The Assignment Problem with Nearly Monge Arrays and Incompatible Partner Indices. Discrete Applied Mathematics. 183-203 211

White J, Ruddle RA, Howes A, Snowden RJ, Savage J, Jones DM. 2001. Eyes in the sky: human factors and uninhabited air vehicles. Journal of Defence Science. 88-94 6
Wijayathunga VN, Ridgway JP, Ingham E, Treanor D, Carey D, Bulpitt A, Magee D, Damion R, Wilcox RK. 2015. A non-destructive method to distinguish the internal constituent architecture of the intervertebral discs using 9.4 Tesla Magnetic Resonance Imaging. Spine. E1315-E1322 40.
24

Williamson DR, Cohen N. 2012. Size matters: modeling the effects of body shape on locomotive behavior in the nematode C. elegans. BMC Neuroscience. 13.
S1 
Womble SP, Cohen N. 2010. Time and Space in Neuronal Networks: The Effects of Spatial Organization on Network Behavior. COMPLEXITY. 45-50 16.
2 
Wright A, Magee D, Quirke P, Treanor DE. 2014. Towards automatic patient selection for chemotherapy in colorectal cancer trials. SPIE Proceedings Gurcan MN; Madabhushi A (eds.). 
Wright AI, Coe AMM, Dattani M, Toh E, Hutchins GGA, West NP, Grabsch HI, Magee DR, Quirke P, Treanor DE. 2012. Automatic Image Analysis to Calculate the Cancer: Stroma Ratio in Colorectal Cancer. JOURNAL OF PATHOLOGY. S41-S41 228
Wright AI, Magee DR, Quirke P, Treanor DE. 2015. Prospector: A web-based tool for rapid acquisition of gold standard data for pathology research and image analysis.. Journal of Pathology Informatics. 21-21 6

Xuan ZC, Lassila T, Rozza G, Quarteroni A. 2010. On computing upper and lower bounds on the outputs of linear elasticity problems approximated by the smoothed finite element method. International Journal for Numerical Methods in Engineering. n/a-n/a 
Zakkaroff C, Biglands JD, Greenwood JP, Plein S, Boyle RD, Radjenovic A, Magee DR. 2016. Investigation into diagnostic accuracy of common strategies for automated perfusion motion correction. Journal of Medical Imaging. 3.
2

Zakkaroff C, Magee D, Radjenovic A, Boyle R. 2010. Mediated Spatiotemporal Fusion of Multiple Cardiac Magnetic Resonance Datasets for Patient-specific Perfusion Analysis. COMPUTING IN CARDIOLOGY 2010, VOL 37. 469-472 37
Zhou Y, Magee DR, Treanor D, Bulpitt AJ. 2013. Stain guided mean-shift filtering in automatic detection of human tissue nuclei. Journal of Pathology Informatics. 4.
1

Biglands JD, Ibraheem M, Magee DR, Radjenovic A, Plein S, Greenwood JP. 2015. Quantitative myocardial perfusion performs as well as visual analysis in diagnosing myocardial ischaemia: A CE-MARC sub-study.
Crossfield S, Johnson O, Fleming T. 2016. Large Scale Infrastructure for Health Data Analytics. 
Kengyelics SM, Gislason-Lee AJ, Magee D, Davies AG. 2014. Image quality and X-ray dose for modern cardiac X-ray systems. 
Chakhlevitch N (2014)
On general methodology for solving inverse scheduling problems New Challenges in Scheduling Theory. Aussois, France

Kirby J; Law M; Pearson DJ; Johnson OA; Clamp SE; Hawker MD (2011) Teaching undergraduates using live clinical information systems: How to ensure you are delivering TD 19 ASME Annual Scientific Meeting
No publications to show.