{"id":"00939847","next":"","publications":{"selected_publication":[{"html":"

Gusnanto A; Ploner A; Shuweihdi F; Pawitan Y<\/span> (2013)<\/span> Partial least squares and logistic regression random-effects estimates for gene selection in supervised classification of gene expression data<\/span>. Journal of Biomedical Informatics<\/span>, 46<\/span>, (4)<\/span>, pp. 697-709<\/span>. <\/a><\/p>","publicationid":"263650","date":"2013-08-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Gusnanto A; Ploner A; Shuweihdi F; Pawitan Y<\/span> (2013)<\/span> Partial least squares and logistic regression random-effects estimates for gene selection in supervised classification of gene expression data<\/span>. J Biomed Inform<\/span>, 46<\/span>, (4)<\/span>, pp. 697-709<\/span>. <\/a><\/p>","publicationid":"167871","date":"2013-08-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Lee W; Gusnanto A; Salim A; Magnusson P; Sim X; Tai ES; Pawitan Y<\/span> (2012)<\/span> Estimating the number of true discoveries in genome-wide association studies<\/span>. Statistics in medicine<\/span>, 31<\/span>, (11-12)<\/span>, pp. 1177-1189<\/span>. <\/a><\/p>","publicationid":"153444","date":"2012-05-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Gusnanto A; Wood HM; Pawitan Y; Rabbitts P; Berri S<\/span> (2012)<\/span> Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data<\/span>. Bioinformatics (Oxford, England)<\/span>, 28<\/span>, (1)<\/span>, pp. 40-47<\/span>. <\/a><\/p>","publicationid":"155735","date":"2012-01-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Sivapalaratnam S; Farrugia R; Nieuwdorp M; Langford CF; van Beem RT; Maiwald S; Zwaginga JJ; Gusnanto A; Watkins NA; Trip MD; Ouwehand WH<\/span> (2011)<\/span> Identification of candidate genes linking systemic inflammation to atherosclerosis; results of a human in vivo LPS infusion study<\/span>. BMC MED GENOMICS<\/span>, 4<\/span>, (1)<\/span>, pp. 64<\/span>. <\/a><\/p>","publicationid":"147330","date":"2011-08-10","publicationtype":"Journal article","isfavourite":"1"}],"favourites":[],"journal_article":[{"html":"

Muhammad M; Ul-Saufie AZ; Radi NFA; Noor NM; Gusnanto A<\/span> (2025)<\/span> Modified resampling strategy for extreme values in imbalanced air pollution data using moving block bootstrapping approach with relevance weighting (MBB-RW)<\/span>. Sci Rep<\/span>, 16<\/span>, (1)<\/span>, pp. 290<\/span>. <\/a><\/p>","publicationid":"1141527","date":"2025-12-12","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Ajaib S; Winter-Luke J; Digby RJ; Pollock S; Hemmings G; Gusnanto A; Chakrabarty A; Ismail A; Wilson E; Hunter B; Filby A; McDonald D; Brockman AA; Ihrie RA; Stead LF<\/span> (2025)<\/span> Spatial profiling of longitudinal glioblastoma reveals consistent changes in cellular architecture, post-treatment<\/span>. Neuro Oncol<\/span>, 27<\/span>, (12)<\/span>, pp. 3145-3160<\/span>. <\/a> <\/a><\/p>","publicationid":"1099473","date":"2025-12-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Unsworth S; Gusnanto A; Ka\u0161\u0107elan D; Pr\u00e9vost P; Serratrice L; Tuller L; De Cat C<\/span> (2025)<\/span> Unpacking the Richness of Language Experience as a Predictor of Bilingual Children's Language Proficiency<\/span>. J Child Lang<\/span>, pp. 1-33<\/span>. <\/a> <\/a><\/p>","publicationid":"1101818","date":"2025-11-12","publicationtype":"Journal article","isfavourite":"0"},{"html":"

De Cat C; Gusnanto A; Ka\u0161\u0107elan D; Pr\u00e9vost P; Serratrice L; Tuller L; Unsworth S<\/span> (2025)<\/span> How detailed do measures of bilingual language experience need to be? A cost-benefit analysis using the Q-BEx questionnaire<\/span>. Bilingualism<\/span>, pp. 1-12<\/span>. <\/a> <\/a><\/p>","publicationid":"1090715","date":"2025-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Sumague TS; Niazy AA; Lambarte RNA; Nafisah IA; Gusnanto A<\/span> (2024)<\/span> Influence of budesonide and fluticasone propionate in the anti-osteoporotic potential in human bone marrow-derived mesenchymal stem cells via stimulation of osteogenic differentiation<\/span>. Heliyon<\/span>, 10<\/span>, (20)<\/span>, pp. e39475<\/span>. <\/a><\/p>","publicationid":"876123","date":"2024-10-30","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Srihar K; Gusnanto A; Richman SD; West NP; Galvin L; Bottomley D; Hemmings G; Glover A; Natarajan S; Miller R; Arif S; Rossington H; Dunwell TL; Dailey SC; Fontarum G; George A; Wu W; Quirke P; Wood HM<\/span> (2024)<\/span> The ATOM-Seq sequence capture panel can accurately predict microsatellite instability status in formalin-fixed tumour samples, alongside routine gene mutation testing<\/span>. Sci Rep<\/span>, 14<\/span>, (1)<\/span>, pp. 21870<\/span>. <\/a> <\/a><\/p>","publicationid":"832573","date":"2024-09-19","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Wungu CDK; Susilo H; Alsagaff MY; Witarto BS; Witarto AP; Pakpahan C; Gusnanto A<\/span> (2024)<\/span> Role of klotho and fibroblast growth factor 23 in arterial calcification, thickness, and stiffness: a meta-analysis of observational studies<\/span>. Sci Rep<\/span>, 14<\/span>, (1)<\/span>, pp. 5712<\/span>. <\/a><\/p>","publicationid":"647576","date":"2024-03-08","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Putra AC; Burhan E; Aufa A; Bur R; Pangestu H; Bahri S; Souvriyanti E; Muchtiar M; Erlina A; Aditama TY; Yuliwulandari R; Kusuma I; Suciati Y; Rifqatussaadah R; Jalal F; Gusnanto A; Utomo ARH<\/span> (2024)<\/span> Evaluation of Mortality Risk Factors of COVID-19 in Jakarta Tertiary Hospital During Peak of Second Wave and Predictive Utility of Community RT-PCR Low CT Values<\/span>. Respiratory Science<\/span>, 4<\/span>, (2)<\/span>, pp. 120-132<\/span>. <\/a><\/p>","publicationid":"672113","date":"2024-02-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Tanner G; Barrow R; Ajaib S; Al-Jabri M; Ahmed N; Pollock S; Finetti M; Rippaus N; Bruns AF; Syed K; Poulter JA; Matthews L; Hughes T; Wilson E; Johnson C; Varn FS; Br\u00fcning-Richardson A; Hogg C; Droop A; Gusnanto A; Care MA; Cutillo L; Westhead DR; Short SC; Jenkinson MD; Brodbelt A; Chakrabarty A; Ismail A; Verhaak RGW; Stead LF<\/span> (2024)<\/span> IDHwt glioblastomas can be stratified by their transcriptional response to standard treatment, with implications for targeted therapy<\/span>. Genome Biol<\/span>, 25<\/span>, (1)<\/span>, pp. 45<\/span>. <\/a> <\/a><\/p>","publicationid":"641191","date":"2024-02-07","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Salaki DT; Kurnia A; Sartono B; Mangku IW; Gusnanto A<\/span> (2024)<\/span> Model averaging in calibration of near-infrared instruments with correlated high-dimensional data<\/span>. J Appl Stat<\/span>, 51<\/span>, (2)<\/span>, pp. 279-297<\/span>. <\/a> <\/a><\/p>","publicationid":"592509","date":"2024-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Witarto AP; Witarto BS; Pramudito SL; Ratri LC; Wairooy NAP; Konstantin T; Putra AJE; Wungu CDK; Mufida AZ; Gusnanto A<\/span> (2023)<\/span> Risk factors and 26-years worldwide prevalence of endoscopic erosive esophagitis from 1997 to 2022: a meta-analysis<\/span>. Sci Rep<\/span>, 13<\/span>, (1)<\/span>, pp. 15249<\/span>. <\/a><\/p>","publicationid":"630257","date":"2023-09-14","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Ajaib S; Lodha D; Pollock S; Hemmings G; Finetti MA; Gusnanto A; Chakrabarty A; Ismail A; Wilson E; Varn FS; Hunter B; Filby A; Brockman AA; McDonald D; Verhaak RGW; Ihrie RA; Stead LF<\/span> (2023)<\/span> GBMdeconvoluteR accurately infers proportions of neoplastic and immune cell populations from bulk glioblastoma transcriptomics data<\/span>. Neuro Oncol<\/span>, 25<\/span>, (7)<\/span>, pp. 1236-1248<\/span>. <\/a> <\/a><\/p>","publicationid":"611903","date":"2023-07-06","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Saputra PBT; Kurniawan RB; Trilistyoati D; Farabi MJA; Susilo H; Alsagaff MY; Oktaviono YH; Sutanto H; Gusnanto A; Dyah Kencono Wungu C<\/span> (2023)<\/span> Myocarditis and coronavirus disease 2019 vaccination: A systematic review and meta-summary of cases<\/span>. Biomol Biomed<\/span>, 23<\/span>, (4)<\/span>, pp. 546-567<\/span>. <\/a><\/p>","publicationid":"613551","date":"2023-07-03","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Saputra PBT; Jannah AR; Rofananda IF; Al-Farabi MJ; Wungu CDK; Susilo H; Alsagaff MY; Gusnanto A; Oktaviono YH<\/span> (2023)<\/span> Clinical characteristics, management, and outcomes of pulmonary valve myxoma: systematic review of published case reports<\/span>. World J Surg Oncol<\/span>, 21<\/span>, (1)<\/span>, pp. 99<\/span>. <\/a><\/p>","publicationid":"615472","date":"2023-03-20","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Khurram A; Gusnanto A; Aristidou P<\/span> (2022)<\/span> A feature-subspace-based ensemble method for estimating long-term voltage stability margins<\/span>. Electric Power Systems Research<\/span>, 212<\/span>, pp. 108481<\/span>. <\/a> <\/a><\/p>","publicationid":"590798","date":"2022-11-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Nugroho AC; Herlambang S; Gusnanto A<\/span> (2022)<\/span> Short-Term Impact of COVID-19 Pandemic in Indonesian Stock Prices<\/span>. Jurnal Dinamika Manajemen<\/span>, 13<\/span>, (2)<\/span>, pp. 162-172<\/span>. <\/a><\/p>","publicationid":"672114","date":"2022-08-10","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Alqahtani K; Taylor CC; Wood HM; Gusnanto A<\/span> (2022)<\/span> Sparse modelling of cancer patients' survival based on genomic copy number alterations<\/span>. J Biomed Inform<\/span>, 128<\/span>, pp. 104025<\/span>. <\/a> <\/a><\/p>","publicationid":"581348","date":"2022-04-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A<\/span> (2021)<\/span> Copy number alterations in cancer: detection and precision medicine<\/span>. BIO Web of Conferences<\/span>, 41<\/span>, pp. 02005<\/span>. <\/a><\/p>","publicationid":"672116","date":"2021-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Mwikali Muli A; Gusnanto A; Houwing-Duistermaat J<\/span> (2021)<\/span> Use of shared gamma frailty model in analysis of survival data in twins<\/span>. Theor Biol Forum<\/span>, 114<\/span>, (1-2)<\/span>, pp. 45-58<\/span>. <\/a><\/p>","publicationid":"585529","date":"2021-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Kaymaz \u00d6; Alqahtani K; Wood HM; Gusnanto A<\/span> (2021)<\/span> Prediction of tumour pathological subtype from genomic profile using sparse logistic regression with random effects<\/span>. J Appl Stat<\/span>, 48<\/span>, (4)<\/span>, pp. 605-622<\/span>. <\/a> <\/a><\/p>","publicationid":"522372","date":"2021-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Telford A; Taylor CC; Wood HM; Gusnanto A<\/span> (2020)<\/span> Properties and approximate p-value calculation of the Cramer test<\/span>. Journal of Statistical Computation and Simulation<\/span>, 90<\/span>, (11)<\/span>, pp. 1965-1981<\/span>. <\/a> <\/a><\/p>","publicationid":"526992","date":"2020-07-23","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Abushilah SF; Taylor CC; Gusnanto A<\/span> (2020)<\/span> Geometry-based distance for clustering amino acids<\/span>. J Appl Stat<\/span>, 47<\/span>, (7)<\/span>, pp. 1235-1250<\/span>. <\/a> <\/a><\/p>","publicationid":"509278","date":"2020-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Christophides D; Appelt AL; Gusnanto A; Lilley J; Sebag-Montefiore D<\/span> (2018)<\/span> Method for Automatic Selection of Parameters in Normal Tissue Complication Probability Modeling<\/span>. Int J Radiat Oncol Biol Phys<\/span>, 101<\/span>, (3)<\/span>, pp. 704-712<\/span>. <\/a> <\/a><\/p>","publicationid":"462332","date":"2018-07-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

De Cat C; Gusnanto A; Serratrice L<\/span> (2018)<\/span> Identifying a threshold for the executive function advantage in bilingual children<\/span>. Studies in Second Language Acquisition<\/span>, 40<\/span>, (1)<\/span>, pp. 119-151<\/span>. <\/a> <\/a><\/p>","publicationid":"370404","date":"2018-03-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Nooney C; Barber S; Gusnanto A; Gilks WR<\/span> (2017)<\/span> A statistical method for analysing cospeciation in tritrophic ecology using electrical circuit theory<\/span>. Stat Appl Genet Mol Biol<\/span>, 16<\/span>, (5-6)<\/span>, pp. 313-331<\/span>. <\/a> <\/a><\/p>","publicationid":"446750","date":"2017-11-27","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Gosling JP; Pope C<\/span> (2017)<\/span> Identification of transcript regulatory patterns in cell differentiation<\/span>. Bioinformatics<\/span>, 33<\/span>, (20)<\/span>, pp. 3235-3242<\/span>. <\/a> <\/a><\/p>","publicationid":"433801","date":"2017-10-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Houwing-Duistermaat JJ; Uh HW; Gusnanto A<\/span> (2017)<\/span> Discussion on the paper \u2018Statistical contributions to bioinformatics: Design, modelling, structure learning and integration\u2019 by Jeffrey S. Morris and Veerabhadran Baladandayuthapani<\/span>. Statistical Modelling<\/span>, 17<\/span>, (4-5)<\/span>, pp. 319-326<\/span>. <\/a> <\/a><\/p>","publicationid":"439242","date":"2017-08-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Shuweihdi F; Taylor CC; Gusnanto A<\/span> (2017)<\/span> Classification of form under heterogeneity and non-isotropic errors<\/span>. Journal of Applied Statistics<\/span>, 44<\/span>, (8)<\/span>, pp. 1495-1508<\/span>. <\/a> <\/a><\/p>","publicationid":"373681","date":"2017-06-11","publicationtype":"Journal article","isfavourite":"0"},{"html":"

McArdle A; Gusnanto A; Earl K; Sakellariou G; Lawton C; Owens D; Close G; Beadsworth M; Dye L<\/span> (2017)<\/span> The role of IP\u201010 in Chronic Fatigue Syndrome<\/span>. The FASEB Journal<\/span>, 31<\/span>, (S1)<\/span>. <\/a><\/p>","publicationid":"672115","date":"2017-04-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Tcherveniakov P; Shuweihdi F; Samman M; Rabbitts P; Wood HM<\/span> (2015)<\/span> Stratifying tumour subtypes based on copy number alteration profiles using next-generation sequence data<\/span>. Bioinformatics<\/span>, 31<\/span>, (16)<\/span>, pp. 2713-2720<\/span>. <\/a> <\/a><\/p>","publicationid":"322419","date":"2015-08-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Nooney C; Gusnanto A; Gilks WR; Barber S<\/span> (2015)<\/span> Do protein structures evolve around 'anchor' residues?<\/span> GEOMETRY DRIVEN STATISTICS<\/span>, pp. 313-336<\/span>.<\/p>","publicationid":"375017","date":"2015-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Pawitan Y<\/span> (2015)<\/span> Sparse alternatives to ridge regression: a random effects approach<\/span>. Journal of Applied Statistics<\/span>, 42<\/span>, (1)<\/span>, pp. 12-26<\/span>. <\/a><\/p>","publicationid":"308095","date":"2015-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Pawitan Y<\/span> (2015)<\/span> Sparse alternatives to ridge regression: a random effects approach<\/span>. JOURNAL OF APPLIED STATISTICS<\/span>, 42<\/span>, (1)<\/span>, pp. 12-26<\/span>. <\/a><\/p>","publicationid":"292165","date":"2015-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Taylor CC; Nafisah I; Wood HM; Rabbitts P; Berri S<\/span> (2014)<\/span> Estimating optimal window size for analysis of low-coverage next-generation sequence data<\/span>. Bioinformatics (Oxford, England)<\/span>, 30<\/span>, (13)<\/span>, pp. 1823-1829<\/span>. <\/a><\/p>","publicationid":"280834","date":"2014-07-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Ploner A; Shuweihdi F; Pawitan Y<\/span> (2013)<\/span> Partial least squares and logistic regression random-effects estimates for gene selection in supervised classification of gene expression data<\/span>. Journal of Biomedical Informatics<\/span>, 46<\/span>, (4)<\/span>, pp. 697-709<\/span>. <\/a><\/p>","publicationid":"263650","date":"2013-08-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Gusnanto A; Ploner A; Shuweihdi F; Pawitan Y<\/span> (2013)<\/span> Partial least squares and logistic regression random-effects estimates for gene selection in supervised classification of gene expression data<\/span>. J Biomed Inform<\/span>, 46<\/span>, (4)<\/span>, pp. 697-709<\/span>. <\/a><\/p>","publicationid":"167871","date":"2013-08-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Myrissa K; Dye L; Gusnanto A; Danks R; Lawton C<\/span> (2013)<\/span> PREDICTORS OF WEIGHT LOSS AND\/OR WEIGHT LOSS MAINTENANCE: AN INTERNET BASED SURVEY<\/span>. ANNALS OF NUTRITION AND METABOLISM<\/span>, 63<\/span>, pp. 1362<\/span>.<\/p>","publicationid":"272837","date":"2013-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Lee W; Gusnanto A; Salim A; Magnusson P; Sim X; Tai ES; Pawitan Y<\/span> (2012)<\/span> Estimating the number of true discoveries in genome-wide association studies<\/span>. Statistics in Medicine<\/span>, 31<\/span>, (11-12)<\/span>, pp. 1177-1189<\/span>. <\/a><\/p>","publicationid":"212931","date":"2012-05-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Lee W; Gusnanto A; Salim A; Magnusson P; Sim X; Tai ES; Pawitan Y<\/span> (2012)<\/span> Estimating the number of true discoveries in genome-wide association studies<\/span>. Statistics in medicine<\/span>, 31<\/span>, (11-12)<\/span>, pp. 1177-1189<\/span>. <\/a><\/p>","publicationid":"153444","date":"2012-05-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Gusnanto A; Wood HM; Pawitan Y; Rabbitts P; Berri S<\/span> (2012)<\/span> Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data<\/span>. Bioinformatics (Oxford, England)<\/span>, 28<\/span>, (1)<\/span>, pp. 40-47<\/span>. <\/a><\/p>","publicationid":"155735","date":"2012-01-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Sivapalaratnam S; Farrugia R; Nieuwdorp M; Langford CF; van Beem RT; Maiwald S; Zwaginga JJ; Gusnanto A; Watkins NA; Trip MD; Ouwehand WH<\/span> (2011)<\/span> Identification of candidate genes linking systemic inflammation to atherosclerosis; results of a human in vivo LPS infusion study<\/span>. BMC MED GENOMICS<\/span>, 4<\/span>, (1)<\/span>, pp. 64<\/span>. <\/a><\/p>","publicationid":"147330","date":"2011-08-10","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Goodall AH; Burns P; Salles I; Macaulay IC; Jones CI; Ardissino D; de Bono B; Bray SL; Deckmyn H; Dudbridge F; Fitzgerald DJ; Garner SF; Gusnanto A; Koch K; Langford C; O'Connor MN; Rice CM; Stemple D; Stephens J; Trip MD; Zwaginga JJ; Samani NJ; Watkins NA; Maguire PB; Ouwehand WH; Bloodomics Consortium<\/span> (2010)<\/span> Transcription profiling in human platelets reveals LRRFIP1 as a novel protein regulating platelet function<\/span>. BLOOD<\/span>, 116<\/span>, (22)<\/span>, pp. 4646-4656<\/span>. <\/a><\/p>","publicationid":"125012","date":"2010-11-25","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Berri S; Wood HM; Rabbitts P<\/span> (2010)<\/span> Detecting copy number aberrations (CNA) in cancer genomes using high-throughput sequencing technologies<\/span>. Clinical Cancer Research<\/span>, 16<\/span>, (19_Supplement)<\/span>, pp. A2<\/span>. <\/a><\/p>","publicationid":"661044","date":"2010-10-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Watkins NA; Gusnanto A; de Bono B; De S; Miranda-Saavedra D; Hardie DL; Angenent WGJ; Attwood AP; Ellis PD; Erber W; Foad NS; Garner SF; Isacke CM; Jolley J; Koch K; Macaulay IC; Morley SL; Rendon A; Rice KM; Taylor N; Thijssen-Timmer DC; Tijssen MR; van der Schoot CE; Wernisch L; Winzer T; Dudbridge F; Buckley CD; Langford CF; Teichmann S; Goettgens B; Ouwehand WH<\/span> (2009)<\/span> A HaemAtlas: characterizing gene expression in differentiated human blood cells<\/span>. BLOOD<\/span>, 113<\/span>, (19)<\/span>, pp. E1-E9<\/span>. <\/a><\/p>","publicationid":"110354","date":"2009-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Watkins NA; Tijssen MR; Gusnanto A; de Bono B; De S; Miranda-Saavedra D; Angenent W; Attwood A; Langford C; Erber WN; Foad N; Garner SF; Rendon A; Rice C; Thijssen-Timmer D; Van der Schoot CE; Dudbridge F; Teichmann S; Gottgens B; Ouwehand WH<\/span> (2008)<\/span> The HaemAtlas: Characterising Gene Expression in Differentiated Human Blood Cells<\/span>. Blood<\/span>, 112<\/span>, (11)<\/span>, pp. 2453<\/span>. <\/a><\/p>","publicationid":"672119","date":"2008-11-16","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Watkins NA; Tussen MR; Gusnanto A; de Bono B; De S; Miranda-Saavedra D; Angenent W; Attwood A; Langford C; Erber WN; Foad N; Garner SF; Rendon A; Rice C; Thijssen-Timmer D; Van der Schoot CE; Dudbridge F; Teichmann S; Gottgens B; Ouwehand WH<\/span> (2008)<\/span> The HaemAtlas: Characterising Gene Expression in Differentiated Human Blood Cells<\/span>. BLOOD<\/span>, 112<\/span>, (11)<\/span>, pp. 853<\/span>. <\/a><\/p>","publicationid":"110266","date":"2008-11-16","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Sivapalaratnam S; Farrugia R; Nieuwdorp M; Gusnanto A; Watkins NA; Zwaginga J-J; Ouwehand WH; Trip MD; Stroes ES; Kastelein JJ<\/span> (2008)<\/span> Abstract 5507: Toll Like Receptor 4 Activation Elicits Pro-atherogenic Gene Activation In Monocytes In Humans<\/span>. Circulation<\/span>, 118<\/span>, (suppl_18)<\/span>. <\/a><\/p>","publicationid":"672117","date":"2008-10-28","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Dudbridge F; Gusnanto A<\/span> (2008)<\/span> Estimation of significance thresholds for genomewide association scans<\/span>. GENET EPIDEMIOL<\/span>, 32<\/span>, (3)<\/span>, pp. 227-234<\/span>. <\/a><\/p>","publicationid":"115518","date":"2008-04-01","publicationtype":"Journal article","isfavourite":"1"},{"html":"

Burns P; Gusnanto A; Macaulay IC; Rankin A; Tom B; Langford CF; Dudbridge F; Ouwehand WH; Watkins NA; Bloodomics Consortium<\/span> (2008)<\/span> Identification of variation in the platelet transcriptome associated with Glycoprotein 6 haplotype<\/span>. PLATELETS<\/span>, 19<\/span>, (4)<\/span>, pp. 258-267<\/span>. <\/a><\/p>","publicationid":"59707","date":"2008-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Sivapalaratnam S; Farrugia R; Nieuwdorp M; Gusnanto A; Watkins NA; Zwaginga J-J; Ouwehand WH; Trip MD; Stroes ES; Kastelein JJ<\/span> (2008)<\/span> Toll Like Receptor 4 Activation Elicits Pro-atherogenic Gene Activation In Monocytes In Humans<\/span>. CIRCULATION<\/span>, 118<\/span>, (18)<\/span>, pp. S563<\/span>.<\/p>","publicationid":"54243","date":"2008-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Huang J; Gusnanto A; O'Sullivan K; Staaf J; Borg A; Pawitan Y<\/span> (2007)<\/span> Robust smooth segmentation approach for array CGH data analysis<\/span>. Bioinformatics<\/span>, 23<\/span>, (18)<\/span>, pp. 2463-2469<\/span>. <\/a><\/p>","publicationid":"109396","date":"2007-09-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Foukakis T; Gusnanto A; Au AYM; Hoog A; Lui WO; Larsson C; Wallin G; Zedenius J<\/span> (2007)<\/span> A PCR-based expression signature of malignancy in follicular thyroid tumors<\/span>. ENDOCR-RELAT CANCER<\/span>, 14<\/span>, (2)<\/span>, pp. 381-391<\/span>. <\/a><\/p>","publicationid":"78040","date":"2007-06-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Tom B; Burns P; Macaulay I; Thijssen-Timmer DC; Tijssen MR; Langford C; Watkins N; Ouwehand W; Berzuini C; Dudbridge F<\/span> (2007)<\/span> Improving the power to detect differentially expressed genes in comparative microarray experiments by including information from self-self hybridizations<\/span>. Comput Biol Chem<\/span>, 31<\/span>, (3)<\/span>, pp. 178-185<\/span>. <\/a><\/p>","publicationid":"37069","date":"2007-06-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Macaulay IC; Tijssen MR; Thijssen-Timmer DC; Gusnanto A; Steward M; Burns P; Langford CF; Ellis PD; Dudbridge F; Zwaginga J-J; Watkins NA; van der Schoot CE; Ouwehand WH<\/span> (2007)<\/span> Comparative gene expression profiling of in vitro differentiated megakaryocytes and erythroblasts identifies novel activatory and inhibitory platelet membrane proteins<\/span>. Blood<\/span>, 109<\/span>, (8)<\/span>, pp. 3260-3269<\/span>. <\/a><\/p>","publicationid":"65593","date":"2007-04-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Calza S; Pawitan Y<\/span> (2007)<\/span> Identification of differentially expressed genes and false discovery rate in microarray studies<\/span>. CURR OPIN LIPIDOL<\/span>, 18<\/span>, (2)<\/span>, pp. 187-193<\/span>. <\/a><\/p>","publicationid":"97750","date":"2007-04-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Carr P; Gusnanto A; Macaulay IC; Dudbridge F; Langford C; Ouwehand WH; Watkins NA<\/span> (2006)<\/span> YS03\u2028Gene Expression Profiling of Platelet RNA Identifies Differentially Expressed Genes Associated with Collagen Signalling Responses<\/span>. Transfusion Medicine<\/span>, 16<\/span>, (s1)<\/span>, pp. 16-17<\/span>. <\/a><\/p>","publicationid":"672122","date":"2006-10-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Macaulay IC; Tijssen MR; Thijssen\u2010Timmer D; Gusnanto A; Carr P; Steward M; Langford C; Ellis P; Dudbridge F; Zwaginga J; Watkins NA; Van Der Schoot E; Ouwehand WH<\/span> (2006)<\/span> P50\u2028Novel Activatory and Inhibitory Platelet Receptors Identified Through Comparative Gene Expression Profiling of Megakaryocytes and Erythroblasts<\/span>. Transfusion Medicine<\/span>, 16<\/span>, (s1)<\/span>, pp. 46<\/span>. <\/a><\/p>","publicationid":"672121","date":"2006-10-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Ploner A; Calza S; Gusnanto A; Pawitan Y<\/span> (2006)<\/span> Multidimensional local false discovery rate for microarray studies<\/span>. BIOINFORMATICS<\/span>, 22<\/span>, (5)<\/span>, pp. 556-565<\/span>. <\/a><\/p>","publicationid":"95169","date":"2006-03-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Dudbridge F; Gusnanto A; Koeleman BPC<\/span> (2006)<\/span> Detecting multiple associations in genome-wide studies<\/span>. Human genomics<\/span>, 2<\/span>, (5)<\/span>, pp. 310-317<\/span>. <\/a><\/p>","publicationid":"29854","date":"2006-03-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Macaulay IC; Carr P; Gusnanto A; Ouwehand WH; Fitzgerald D; Watkins NA<\/span> (2005)<\/span> Platelet genomics and proteomics in human heat and disease<\/span>. J CLIN INVEST<\/span>, 115<\/span>, (12)<\/span>, pp. 3370-3377<\/span>. <\/a><\/p>","publicationid":"87093","date":"2005-12-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Ploner A; Pawitan Y<\/span> (2005)<\/span> Fold-change estimation of differentially expressed genes using mixture mixed-model<\/span>. Statistical Applications in Genetics and Molecular Biology<\/span>, 4<\/span>, (1)<\/span>. <\/a><\/p>","publicationid":"192987","date":"2005-09-21","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Pawitan Y; Michiels S; Koscielny S; Gusnanto A; Ploner A<\/span> (2005)<\/span> False discovery rate, sensitivity and sample size for microarray studies<\/span>. BIOINFORMATICS<\/span>, 21<\/span>, (13)<\/span>, pp. 3017-3024<\/span>. <\/a><\/p>","publicationid":"108501","date":"2005-07-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Ploner A; Pawitan Y<\/span> (2005)<\/span> Fold-change estimation of differentially expressed genes using mixture mixed-model<\/span>. Stat Appl Genet Mol Biol<\/span>, 4<\/span>, (1)<\/span>, pp. Article26<\/span>. <\/a><\/p>","publicationid":"82855","date":"2005-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Dreij K; Bajak E; Sundberg K; Cotgreave I; Jernstrom B; Seidel A; Gusnanto A<\/span> (2004)<\/span> DNA adducts of benzo[a]pyrene- and dibenzo[a,l]pyrene-diol epoxides in human lung epithelial cells: Kinetics of adduct removal, effects on cell cycle checkpoints, and gene expression<\/span>. POLYCYCL AROMAT COMP<\/span>, 24<\/span>, (4-5)<\/span>, pp. 549-566<\/span>. <\/a><\/p>","publicationid":"113153","date":"2004-08-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Xue YT; Haas SA; Brino L; Gusnanto A; Reimers M; Talibi D; Vingron M; Ekwall K; Wright APH<\/span> (2004)<\/span> A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift<\/span>. YEAST<\/span>, 21<\/span>, (1)<\/span>, pp. 25-39<\/span>. <\/a><\/p>","publicationid":"45964","date":"2004-01-15","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A<\/span> (2004)<\/span> A DNA microarray for fission yeast: minimal changes after temperature shift<\/span>. Yeast<\/span>, 21<\/span>, pp. 25-39<\/span>.<\/p>","publicationid":"11449","date":"2004-01-01","publicationtype":"Journal article","isfavourite":"0"},{"html":"

Gusnanto A; Pawitan Y; Huang J; Lane B<\/span> (2003)<\/span> Variable selection in random calibration of near-infrared instruments: ridge regression and partial least squares regression settings<\/span>. J CHEMOMETR<\/span>, 17<\/span>, (3)<\/span>, pp. 174-185<\/span>. <\/a><\/p>","publicationid":"117808","date":"2003-03-01","publicationtype":"Journal article","isfavourite":"0"}],"conference_paper":[{"html":"

Ummi MA; Barber S; Gusnanto A<\/span> (2023)<\/span> Comparison of wavelet methods for segmentation of high-throughput data<\/span>. Aip Conference Proceedings<\/span>, pp. 030018<\/span>. <\/a><\/p>","publicationid":"642250","date":"2023-12-28","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Khurram A; Gusnanto A; Aristidou P<\/span> (2021)<\/span> Detection of Oscillatory Modes in Power Systems using Empirical Wavelet Transform<\/span>. 2021 IEEE Madrid Powertech Powertech 2021 Conference Proceedings<\/span>, pp. 1-6<\/span>. <\/a> <\/a><\/p>","publicationid":"560884","date":"2021-06-28","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Hutajulu SH; Sari YK; Oktariani S; Hardiyanti MS; Taroeno-Hariadi KW; Purwanto I; Kurnianda J; Gusnanto A<\/span> (2020)<\/span> Occurence and risk factors of chemotherapy-induced neutropenia in patients with breast cancer: A hospital-based assessment in Indonesia<\/span>. ANNALS OF ONCOLOGY<\/span>, pp. S1375<\/span>. <\/a><\/p>","publicationid":"549495","date":"2020-01-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

McArdle A; Gusnanto A; Earl K; Sakellariou G; Lawton C; Owens D; Close G; Beadsworth M; Dye L<\/span> (2017)<\/span> The role of IP-10 in Chronic Fatigue Syndrome<\/span>. FASEB JOURNAL<\/span>. <\/a><\/p>","publicationid":"439451","date":"2017-01-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Dye L; Schnell R; Croden F; Camidge D; Myrissa K; Garner F; Gusnanto A; Lawton C<\/span> (2015)<\/span> Relationships between menstrual cycle phase, dietary fibre intake, bowel function and digestive symptoms<\/span>. ANNALS OF NUTRITION AND METABOLISM<\/span>, pp. 385<\/span>.<\/p>","publicationid":"357304","date":"2015-01-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Gusnanto A; Dudbridge E<\/span> (2007)<\/span> Estimating significance threshold for genomewide association scans<\/span>. GENET EPIDEMIOL<\/span>, pp. 629<\/span>.<\/p>","publicationid":"99360","date":"2007-09-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Gusnanto A; Dudbridge F<\/span> (2007)<\/span> Estimating genome-wide significance levels for association<\/span>. ANNALS OF HUMAN GENETICS<\/span>, pp. 556-557<\/span>.<\/p>","publicationid":"100742","date":"2007-07-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Macaulay IC; Tijssen MR; Thijssen-Timmer DC; Gusnanto A; Steward M; Tom B; Carr P; Voermans C; De Jong IW; Dudbridge F; Van der Schoot CF; Zwaginga JJ; Watkins NA; Ouwehand WH<\/span> (2006)<\/span> Novel transmembrane megakaryocyte proteins identified by comparative gene expression profiling of in vitro differentiated human megakaryocytes and erythroblasts<\/span>. BRITISH JOURNAL OF HAEMATOLOGY<\/span>, pp. 26<\/span>.<\/p>","publicationid":"112599","date":"2006-04-01","publicationtype":"Conference paper","isfavourite":"0"},{"html":"

Xue YT; Haas S; Brino L; Gusnanto A; Riemers M; Talibi D; Vingron M; Ekwall K; Wright APH<\/span> (2003)<\/span> A DNA microarray for genome-wide gene expression analysis in fission yeast<\/span>. YEAST<\/span>, pp. S333<\/span>.<\/p>","publicationid":"110307","date":"2003-07-01","publicationtype":"Conference paper","isfavourite":"0"}],"presentation_conference_workshop_etc_":[],"book":[],"chapter":[{"html":"

Gusnanto A<\/span> (2019)<\/span> Data analytics in the era of industry 4.0<\/span>. Global Competitiveness: Business Transformation in the Digital Era<\/span>, Routledge<\/a>, pp. 260-263<\/span>. <\/a><\/p>","publicationid":"672120","date":"2019-07-09","publicationtype":"Chapter","isfavourite":"0"},{"html":"

Nooney C; Gusnanto A; Gilks WR; Barber S<\/span> (2015)<\/span> Do protein structures evolve around 'anchor' residues?<\/span> In: Dryden I; Kent J eds<\/span> Geometry Driven Statistics<\/span>, Wiley Series in Probability and Statistics<\/span>, Wiley<\/a>, pp. 311-336<\/span>. <\/a><\/p>","publicationid":"357820","date":"2015-11-27","publicationtype":"Chapter","isfavourite":"0"}],"conference_abstract":[{"html":"

Sriha K; Wood H; Gusnanto A; Richman S; West N; Galvin L; Bottomley D; Glover A; Natarajan S; Miller R; Arif S; Rossington H; Dunwell T; Dailey S; Quirke P<\/span> (2024)<\/span> Using a small NGS panel to predict microsatellite instability in colorectal cancer samples<\/span>. pp. S13-S14<\/span>. <\/a> <\/a><\/p>","publicationid":"870388","date":"2024-01-01","publicationtype":"Conference abstract","isfavourite":"0"}],"preprint":[{"html":"

De Cat C; Serratrice L; Gusnanto A; Prevost P; Tuller L; Unsworth S<\/span> (2026)<\/span> A data-driven approach to the issue of \u201dcatching up with monolinguals\u201d<\/span>. PsyArXiv<\/span>. <\/a><\/p>","publicationid":"1277356","date":"2026-01-01","publicationtype":"Preprint","isfavourite":"0"},{"html":"

De Cat C; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Tuller L; Unsworth S<\/span> (2025)<\/span> How detailed do measures of bilingual language experience need to be? A cost-benefit analysis using the Q-BEx questionnaire<\/span>. Center for Open Science<\/span>. <\/a><\/p>","publicationid":"1092983","date":"2025-08-06","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Unsworth S; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Tuller L; De Cat C<\/span> (2025)<\/span> Unpacking language richness as a predictor of bilingual children\u2019s language proficiency<\/span>. Center for Open Science<\/span>. <\/a><\/p>","publicationid":"1043401","date":"2025-06-03","publicationtype":"Preprint","isfavourite":"0"},{"html":"

De Cat C; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Tuller L; Unsworth S<\/span> (2025)<\/span> How detailed do measures of bilingual language experience need to be? A cost-benefit analysis using the Q-BEx questionnaire<\/span>. Center for Open Science<\/span>. <\/a><\/p>","publicationid":"990895","date":"2025-03-07","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Ajaib S; Pollock S; Hemmings G; Gusnanto A; Chakrabarty A; Ismail A; Wilson E; Hunter B; Filby A; McDonald D; Brockman AA; Ihrie RA; Stead LF<\/span> (2025)<\/span> Spatial profiling of longitudinal glioblastoma reveals consistent changes in cellular architecture, post-treatment<\/span>. openRxiv<\/span>. <\/a><\/p>","publicationid":"964786","date":"2025-02-05","publicationtype":"Preprint","isfavourite":"0"},{"html":"

De Cat C; Tuller L; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Unsworth S<\/span> (2025)<\/span> Using Q-BEx to Identify Risk for Language Impairment in Bilingual Children<\/span>. PsyArXiv<\/span>. <\/a><\/p>","publicationid":"1043400","date":"2025-01-01","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Unsworth S; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Tuller L; De Cat C<\/span> (2024)<\/span> Unpacking language richness as a predictor of bilingual children\u2019s language proficiency<\/span>. Center for Open Science<\/span>. <\/a><\/p>","publicationid":"1039212","date":"2024-07-22","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Unsworth S; Gusnanto A; Ka\u0161\u0107elan D; Prevost P; Serratrice L; Tuller L; De Cat C<\/span> (2024)<\/span> Unpacking language richness as a predictor of bilingual children\u2019s language proficiency<\/span>. Center for Open Science<\/span>. <\/a><\/p>","publicationid":"794788","date":"2024-07-22","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Tanner G; Barrow R; Finetti M; Ajaib S; Ahmed N; Pollock S; Rippaus N; Bruns A; Syed K; Poulter J; Wilson E; Johnson C; Varn F; Br\u00fcning-Richardson A; Hogg C; Droop A; Gusnanto A; Care M; Cutillo L; Westhead D; Short S; Jenkinson M; Brodbelt A; Chakrabarty A; Ismail A; Verhaak RGW; Stead L<\/span> (2023)<\/span> IDHwt glioblastomas can be stratified by their transcriptional response to standard treatment, with implications for targeted therapy<\/span>. bioRxiv<\/span>. <\/a><\/p>","publicationid":"613319","date":"2023-01-01","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Ajaib S; Lodha D; Pollock S; Hemmings G; Finetti M; Gusnanto A; Chakrabarty A; Ismail A; Wilson E; Varn F; Hunter B; Filby A; Brockman A; McDonald D; Verhaak RGW; Ihrie R; Stead L<\/span> (2022)<\/span> GBMdeconvoluteR accurately infers proportions of neoplastic and immune cell populations from bulk glioblastoma transcriptomics data<\/span>. bioRxiv<\/span>. <\/a><\/p>","publicationid":"600870","date":"2022-01-01","publicationtype":"Preprint","isfavourite":"0"},{"html":"

Gusnanto A; Earl KE; Sakellariou GK; Owens DJ; Lightfoot A; Fawcett S; Owen E; Staunton CA; Shu T; Croden FC; Fenech M; Sinclair M; Ratcliffe L; Whysall KA; Haynes R; Wells NM; Jackson MJ; Close GL; Lawton C; Beadsworth MBJ; Dye L; McArdle A<\/span> (2020)<\/span> Discriminatory cytokine profiles predict muscle function, fatigue and cognitive function in patients with Myalgic Encephalomyelitis\/Chronic Fatigue Syndrome (ME\/CFS)<\/span>. openRxiv<\/span>. <\/a><\/p>","publicationid":"672118","date":"2020-08-21","publicationtype":"Preprint","isfavourite":"0"}],"report":[],"internet_publication":[{"html":"

Gusnanto A; Ploner A; Pawitan Y<\/span> (2005)<\/span> Fold-Change Estimation of Differentially Expressed Genes using Mixture Mixed-Model<\/span>. <\/a><\/p>","publicationid":"8087","date":"2005-01-01","publicationtype":"Internet publication","isfavourite":"0"}],"performance":[],"composition":[],"exhibition":[],"poster":[],"artefact":[],"design":[],"patent":[],"scholarly_edition":[],"software_code":[],"thesis_dissertation":[],"other":[],"dataset":[],"media":[],"working_paper":[],"favourite":[{"html":"

Dudbridge F; Gusnanto A<\/span> (2008)<\/span> Estimation of significance thresholds for genomewide association scans<\/span>. GENET EPIDEMIOL<\/span>, 32<\/span>, (3)<\/span>, pp. 227-234<\/span>. <\/a><\/p>","publicationid":"115518","date":"2008-04-01","publicationtype":"Journal article","isfavourite":"1"}]}}